PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754818.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 335aa    MW: 36998.4 Da    PI: 8.3981
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.61.6e-31185241158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RRq Rakl +++kl  ksrkpylheSRh hAl+R RgsgGrF
  XP_022754818.1 185 DGPIYVNAKQYHGILRRRQYRAKLGAQNKL-VKSRKPYLHESRHLHALNRVRGSGGRF 241
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAIRVHNLPK KTFDESSVPS LSHSSVSCPP WWNLNEQQIA QSLPQNISLK VETPSQLYHN  60
AKHLDLQLPD QELTSAQAIG QSHREMGVIG VTNSQCYSSE SGQDESCGKD VEGQVKPVYL  120
LNNPNTLFSI SHLNYNHSVA SVRYPHADAY FGGLFTPYGQ QAIIQAQLAG SAPTRIPLPL  180
DLAEDGPIYV NAKQYHGILR RRQYRAKLGA QNKLVKSRKP YLHESRHLHA LNRVRGSGGR  240
FLSKKKLQHA DPTFNTSSHG ICDASCLDQK NSRSELESHC SPTAEYAGSS TSCSDISIVS  300
NNDSNFQQPE HRLSDISTRM GSMLNGIQHC ASIAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17590.22e-38NF-YA family protein