PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754642.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARR-B
Protein Properties Length: 715aa    MW: 76659 Da    PI: 6.9359
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like76.92.7e-24192245155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k++++Wt+ LH++F+ea++++ G ekA+Pk+ile+m+ +gLt+e+v+SHLQkYR+
  XP_022754642.1 192 KAKVVWTNSLHNQFLEALRHI-GLEKAVPKKILEHMNAQGLTRENVASHLQKYRI 245
                     6799*****************.********************************6 PP
2Myb_DNA-binding33.11.3e-10195244248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT  ++ ++++a +  G +   +k+I ++m+ +g+t++++ s++qky+
   XP_022754642.1 195 VVWTNSLHNQFLEALRHIGLEkaVPKKILEHMNaQGLTRENVASHLQKYR 244
                      68***********************************************7 PP
3Response_reg86.38.6e-2991161109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                     +l+vdD+ + + ++  +l++ +y +va+++++ +al +l+++  +Dl+l+D+ mp+m+G+el ++i++e  k+p+i++++ ++e+ +l+ l  Ga
  XP_022754642.1   9 ILVVDDDSTSLAIISAMLKEWRY-KVATVKTPVDALSNLRANPgVDLVLTDLHMPEMNGIELQRQINREF-KVPVIIMSSDDKESVMLKSLAGGA 101
                     89*********************.****************9999**********************9988.9*********************** PP

                     SEEEESS--HHHHHH CS
    Response_reg  95 kdflsKpfdpeelvk 109
                       f++Kp++p++l +
  XP_022754642.1 102 VFFIVKPVNPDDLKN 116
                     ************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MGSHLKITIL VVDDDSTSLA IISAMLKEWR YKVATVKTPV DALSNLRANP GVDLVLTDLH  60
MPEMNGIELQ RQINREFKVP VIIMSSDDKE SVMLKSLAGG AVFFIVKPVN PDDLKNVWQY  120
AIAAKKGKSV VIEETGSIEG DSSSAGKLSN GEIVSGSSVN DERIKAQMKS KIKSSRKGKD  180
DQEGKTASAP KKAKVVWTNS LHNQFLEALR HIGLEKAVPK KILEHMNAQG LTRENVASHL  240
QKYRIFLKRV AKRSFFPSKP LVEKVLKSSF ASGNPLWLKT AQQYSRLAEL HQMRGLFQPG  300
YGGSVTARNA ASLGSIHFPS QNASSSNSAQ QQHGYGQSRL LGNPANKRLV SGNTNPMYHG  360
NGLGFPNGSN LSLNGGLSGG LFNASNGLTN GANSMHTYQQ HIQSKPDFYN AGSSSQFRFG  420
PFGFHSSSST LATGNIGTVG TYPTLNSSCT NNNSYAGITL TTDGQLIGMS QTHLNGGYGS  480
TNGNCNEIAG MGNQTSRHMA QEGSSSAGLV SINQVSPAST AANQQENTSR LPGLGNGGAS  540
DYTSYHLMKD ASFDNITLSQ QIGDQGYLSN IVVESNDYKF LCQQQAGGEG VQNPEFSSSS  600
IFQEIYSSLD ELLNSDFSGS LSVEETAPCS EQALGQVQSG NEELMETSVV GGAYPSDESY  660
PTNFNQNTNQ QQGVAEQLTG SELSSVFQVN NAPASGDDSS DNQECHHLSR FHSLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-57ARR-B family protein