PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022754525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 689aa MW: 76218 Da PI: 4.9661 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.7 | 6.1e-29 | 208 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G +kA+Pk+il+lm+v+gLt+e+v+SHLQkYRl XP_022754525.1 208 KPRVVWSVELHRKFVAAVNQL-GLDKAVPKKILDLMNVEGLTRENVASHLQKYRL 261 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 41.1 | 4.2e-13 | 210 | 260 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ +g+t++++ s++qky+ XP_022754525.1 210 RVVWSVELHRKFVAAVNQLGLDkaVPKKILDLMNvEGLTRENVASHLQKYR 260 678***********************************************7 PP | |||||||
3 | Response_reg | 82.2 | 1.7e-27 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ +++l+++l+k +y +v++ ++ al++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ +++ + + G XP_022754525.1 26 VLAVDDDPICLKVLENLLRKCQY-QVTTINQAITALKMLRENKnrYDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSAHSDTKLVMKGITHG 118 799********************.***************888888*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel++ XP_022754525.1 119 ACDYLLKPVRIEELTN 134 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 689 aa Download sequence |
MTMEERMGGY NGEDGGKDRF PVGMRVLAVD DDPICLKVLE NLLRKCQYQV TTINQAITAL 60 KMLRENKNRY DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MLSAHSDTKL VMKGITHGAC 120 DYLLKPVRIE ELTNIWQHVV RKKKPDSKDQ INAPNQHKAQ GQTGEAGQTS TSSSDQKVYK 180 KRKDQTEDEE EEGEDNGHES EDPSTQKKPR VVWSVELHRK FVAAVNQLGL DKAVPKKILD 240 LMNVEGLTRE NVASHLQKYR LYLKRLSSVA FQQANMVAAL GSKDPSCLRM DSLDGFGDFR 300 TLTGPGRLSS ASLSSYQPSK MFGRLNCSAT LSLRGISSSV IQQGHSQTLN NSDNGLEKIQ 360 PAVLPANQNQ NGTLFQGIST PIELNQLSQN KSTNHFAEFN CVNDPNVFGS LSNSLSTASG 420 NPLLLQASIQ QMQRSGALGN QSSLGVTSLI QESFDMGVDG SSNFLDHGRC SENWQGTVQL 480 SNFPSSSLSK SEAFSHEQLP TNNLQESISW MSSHFSNNPI DLSSMANSAR LEDCRGNMQG 540 QVGLSDNDIQ NMDYTAKQQW GDRRHDYNGN LNHSLSQVYP LDSASGPMVD QSNAISTNTT 600 DVSLFSQLSG EATYVVQHLE DEKSFFDTKL RSNEDFLFEQ TKPQNGFSEN NFESLEDVMS 660 SMIKPVQSKD TTLMDGEFGF DAYPIGSCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-123 | ARR-B family protein |