PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754265.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 345aa    MW: 38886.3 Da    PI: 7.4649
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754265.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88e-05183202120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++Cp C k+F+r  n++ H+
  XP_022754265.1 183 FSCPLCFKTFNRYNNMQMHM 202
                     89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MSDSDPYSNY FNGWFNLNAF NHLVPSTSTS NPSSHAPNYG YNIYPNTIYR NSSTQYYRPS  60
PPSPPLKEAL PLLSLSPTRH EQQESSCSTA MEVEKNKDKE ESCFSTCGDD ETVTVALHLG  120
LPSPSSCADL ISRFSAADQE VSATAAADKE DVTLASEYQS NTLNKGHYWI PTPAQILIGP  180
TQFSCPLCFK TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY CCAPGCRNNI  240
DHPSSKPLKD FRTLQTHYKR KHGIKPFMCR KCRKTLAVRG DWRTHEKNCG KLWYCTCGSD  300
FKHKRSLKDH IKAFGKGHSA YGIDSFDEED EPASEIEQDN DDSSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-140C2H2 family protein