PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754223.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 463aa MW: 51889.3 Da PI: 8.976

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	44	66	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F++ L Hir H XP_022754223.1 44 HTCSVCSKAFTSGKALGGHIRIH 66 79*******************99 PP
2	zf-C2H2	13.5	0.00021	123	144	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +C+k F++ +L H+r+H XP_022754223.1 123 SCCICNKDFRSMKSLFGHMRNH 144 6********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MDDRAADHGV KNMEKESVSN ETSDLTATKP NKLFLKFNFS KDQHTCSVCS KAFTSGKALG 60 GHIRIHMRGS KSGRHREIAK LQPRNIRRAK AKKRISKNMV LPKATDGAVD PPFSDEESNE 120 KASCCICNKD FRSMKSLFGH MRNHPERGWR GIKPPPSDKN SCCSSISEND KALEVDQNHQ 180 INCATEKDLV SGSDLLKSLP KWTNTAKRCW KFTSDENEIS EAADCLVKLA RGDSFNLGQS 240 SVGYQRKYSP TDKLPIHKTR YWGLANKASE EKRGSVLGNE IGKETGKATL KTESDQQRVP 300 SECKREDSYS PGEEKKMGKF LAIELNCGKF INRKTMEREN KMKVNYADNK IIEKNRWFDQ 360 FQKYPIKPDE EEGDPSTEEG KDRGRNFPSS QTPGSYPKNG PGERLFEAPL NETASTAEGK 420 HLFPKTASQA AEGSQVFTPK ILDFDLNEPY VALDGEAAGT WMN

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MDDRAADHGV KNMEKESVSN ETSDLTATKP NKLFLKFNFS KDQHTCSVCS KAFTSGKALG  60
GHIRIHMRGS KSGRHREIAK LQPRNIRRAK AKKRISKNMV LPKATDGAVD PPFSDEESNE  120
KASCCICNKD FRSMKSLFGH MRNHPERGWR GIKPPPSDKN SCCSSISEND KALEVDQNHQ  180
INCATEKDLV SGSDLLKSLP KWTNTAKRCW KFTSDENEIS EAADCLVKLA RGDSFNLGQS  240
SVGYQRKYSP TDKLPIHKTR YWGLANKASE EKRGSVLGNE IGKETGKATL KTESDQQRVP  300
SECKREDSYS PGEEKKMGKF LAIELNCGKF INRKTMEREN KMKVNYADNK IIEKNRWFDQ  360
FQKYPIKPDE EEGDPSTEEG KDRGRNFPSS QTPGSYPKNG PGERLFEAPL NETASTAEGK  420
HLFPKTASQA AEGSQVFTPK ILDFDLNEPY VALDGEAAGT WMN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26940.1	9e-20	C2H2 family protein