PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754198.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 879aa MW: 97590 Da PI: 5.629

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.2	0.00069	675	713	13	55
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLr ++P++ +k ls Le++++++ Lq XP_022754198.1 675 RQLIQDRIKELRGIIPHS----GKQLSIDHLLERTIKHLLFLQ 713 67799**********9....677*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 879 aa Download sequence
MGEAEMGSVL EQTLKYLCCC NGWSYGVFWR FDKRNSMLLT MEDAYFEEQM GPLVDSMLLK 60 FHILGQGGCG ENTFKFAKIF LCGSFSLKTR RENSEYYNIS NRANLVVFVN LELLAKPLSR 120 ECINGFSQTP MDESNFQNQF SCGIKVPFNL SKCLTRLFQY LFPLSLYNLH LFIIKYDLQT 180 IAIISIERRG VVQFGSTDKI LERLEFLDEA KKLFYDMGSC HGLTPLEIET CCLDGFLSSL 240 PSCGNFYKEN LTTEQVSCSR EPNGWPRSLK KLTKSSSFMR DIQDHNMNSV QHNLSQIRSQ 300 LRTSSTEAQI ISSGKISAVN CLAADTPSAS TWTSDGSIST SFKTPLPSET SIRDSPNPLP 360 KRANDLILGG NAEQNLQGDS TFTSFYCTGE LVDAELPTLD SFVKTAENQH SFGTNGGLLD 420 CVINLQRITE EFNPVDFTTD LSSSFKLDDL SQWFSTSLQH NINGAGATMI KDPSCSVGVT 480 SVSSTLIGGD TVIDIPLRPA ANLLQSSISD TFTSNLEKST IVHDNGNDLF NAVGLDFGFG 540 KTGVFLEDII MPLLHGDNSA VTSGMSESIS ELDVHSMTGM RKGLFSELGL EDLLDGVVGH 600 SCSGGSMNLV QHSHNWDKSN NTIFNKEFHH KSQEGLWMDD SYSVNAGHAV VATSKKPSRK 660 RAKPGESTRP RPKDRQLIQD RIKELRGIIP HSGKQLSIDH LLERTIKHLL FLQGMTKYAD 720 KIKQADEPKL IGQENGMLPK HNKMSGGAAW AFEVGAESIP ILVKDLNPPG QMLIEMLCEV 780 RGFFLEIADA IRALGLNILK GVMELQEDKI WARFIVEANE QVQRAYIIWS LLPLLQQTGI 840 GRIDSASQPS RDIDGGISLF KYYQQPLLLP PVSMAETFQ

Sequence ? help Back to Top

Protein Sequence Length: 879 aa Download sequence

MGEAEMGSVL EQTLKYLCCC NGWSYGVFWR FDKRNSMLLT MEDAYFEEQM GPLVDSMLLK  60
FHILGQGGCG ENTFKFAKIF LCGSFSLKTR RENSEYYNIS NRANLVVFVN LELLAKPLSR  120
ECINGFSQTP MDESNFQNQF SCGIKVPFNL SKCLTRLFQY LFPLSLYNLH LFIIKYDLQT  180
IAIISIERRG VVQFGSTDKI LERLEFLDEA KKLFYDMGSC HGLTPLEIET CCLDGFLSSL  240
PSCGNFYKEN LTTEQVSCSR EPNGWPRSLK KLTKSSSFMR DIQDHNMNSV QHNLSQIRSQ  300
LRTSSTEAQI ISSGKISAVN CLAADTPSAS TWTSDGSIST SFKTPLPSET SIRDSPNPLP  360
KRANDLILGG NAEQNLQGDS TFTSFYCTGE LVDAELPTLD SFVKTAENQH SFGTNGGLLD  420
CVINLQRITE EFNPVDFTTD LSSSFKLDDL SQWFSTSLQH NINGAGATMI KDPSCSVGVT  480
SVSSTLIGGD TVIDIPLRPA ANLLQSSISD TFTSNLEKST IVHDNGNDLF NAVGLDFGFG  540
KTGVFLEDII MPLLHGDNSA VTSGMSESIS ELDVHSMTGM RKGLFSELGL EDLLDGVVGH  600
SCSGGSMNLV QHSHNWDKSN NTIFNKEFHH KSQEGLWMDD SYSVNAGHAV VATSKKPSRK  660
RAKPGESTRP RPKDRQLIQD RIKELRGIIP HSGKQLSIDH LLERTIKHLL FLQGMTKYAD  720
KIKQADEPKL IGQENGMLPK HNKMSGGAAW AFEVGAESIP ILVKDLNPPG QMLIEMLCEV  780
RGFFLEIADA IRALGLNILK GVMELQEDKI WARFIVEANE QVQRAYIIWS LLPLLQQTGI  840
GRIDSASQPS RDIDGGISLF KYYQQPLLLP PVSMAETFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-47	bHLH family protein