PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022754147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 191aa MW: 21915.3 Da PI: 10.2254 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 51.1 | 1.8e-16 | 10 | 53 | 2 | 45 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 r e+ rq +skR++g+ KKA+EL +LCd++ a+++fs+t+k XP_022754147.1 10 RLESMKARQAKYSKRKAGLVKKAKELAILCDVDLALLLFSPTDK 53 6789999**********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MGRRKLKIQR LESMKARQAK YSKRKAGLVK KAKELAILCD VDLALLLFSP TDKPTLFVGQ 60 DKDLSSVVER LSNLTLGERE QRRAYTMKLL KKLYANSNSE DDPTNLSQDS SNSLKLHEDQ 120 LNELKEKLAE KSRILREWKN PNNVEDLSQI KIMEEHLIAS LNRIKNKKSQ LAKELQKRPE 180 GLEGSTVDLE T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18750.1 | 1e-31 | M-type_MADS family protein |