PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022754127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | FAR1 | ||||||||
Protein Properties | Length: 502aa MW: 57840.1 Da PI: 6.1475 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.1 | 4.7e-21 | 65 | 147 | 3 | 90 |
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 n YAke GF +r+s+s ++++++ +++++ C+ g++++++ + ++r+etrtgC a++++++ ++++w++ ++eleHnH+++ XP_022754127.1 65 DNIYAKEQGFGIRVSNSWFRSKKKKRYRAKLSCTSAGFKKKSDAN-----NPRPETRTGCPATVVIRLVDSKRWRIVEVELEHNHQVS 147 578*****************99999****************9988.....9**********************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 502 aa Download sequence |
MEEVCLNSEP VFDEIDEYEG EGEGDCSAVE HDDDDESGAK HSEKEPSQPT VGLEFDSFDE 60 AYDFDNIYAK EQGFGIRVSN SWFRSKKKKR YRAKLSCTSA GFKKKSDANN PRPETRTGCP 120 ATVVIRLVDS KRWRIVEVEL EHNHQVSPQI KSFYESYKKM ILAARMAQPP AEPITEIHTI 180 KLYRTAAMDA GFNGYSNVSE REGIHLAAHP KHLELKEGDA YAVYNCFCCM KLTKPNFFYS 240 MDLDVNGHLK NVFWADARSR AAYRVPEKLG GLKGFEETKR QLNKAVYNSL KIVKFETSWA 300 EIIKQHGLGD NKWLQTLYEA RKLWVPEFVD KYDLALHRNH LKEATANMQS RNSCFELKTR 360 CDFEVQLSKV YTKEIFNKFQ SEVKGMYSCF NTRQVSVNGP IITYIVKETV EIEGNENDVR 420 GYEVLFETSQ MDIRCICNFK CRHADQGSND TDVYSPVHWP NHLHECAVPV VEGAQSQEHY 480 KIALHELQEL LNRFNLLEDS FL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 86 | 105 | KKKKRYRAKLSCTSAGFKKK |
2 | 87 | 106 | KKKKRYRAKLSCTSAGFKKK |
3 | 88 | 107 | KKKKRYRAKLSCTSAGFKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 5e-61 | FAR1 family protein |