PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022754057.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 541aa    MW: 60079 Da    PI: 6.4604
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022754057.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2476.2e-15164223155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  XP_022754057.1 164 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 223
                     57*******************666664477446*************************98 PP

2AP247.15.9e-15268317355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  XP_022754057.1 268 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 317
                     9***************988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MNSNNWLPFP LSPPNSSLPT HLHSSQSHQF NLGLVNDNMG NPFQAQEWNL INTHDTSEVP  60
KVADFLGVSK SESPSLDLVA FNEIHQANDS EYSFQNNSIV QVQNTVVAAN NNYEFQENAN  120
NLQSLTLSMG SGRGSTSETS AENSTNIVEA PPRRTLDTFG QRTSIYRGVT RHRWTGRYEA  180
HLWDNSCRRE GQSRKGRQVY LGGYDKEEKA ARAYDLAALK YWGTSTTTNF PISNYEKELE  240
EMKHMTRQEF VAAIRRKSSG FSRGASMYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST  300
EEEAAEAYDI AAIKFRGLNA VTNFDMSRYD VKAILESNTL PIGGGAAKRL KEAQALESSR  360
KREEIMALGS SLQYGSSSSS RLQAYPLIQV PFEQSQPLLT LQNHDISEYT QDTSSFPQNY  420
IQTQLQLHQQ SGSYMHQSSQ NSQFYNSYIQ NNPALLHGLM NMGCSNSSSV VDNNGSPSGS  480
YSGGYMGNGM ASFLTAENAV RCTEELALVK ADYDMPSGGY GGWSGDSVQG SNPGVFSMWN  540
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.10.0AP2 family protein