PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754006.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 368aa MW: 40435.5 Da PI: 6.4988

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.1	1.8e-08	19	61	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg........H 37 +++C+++++ + +fC+ ++ ++C dC + +H+g H XP_022754006.1 19 AKTCDTCKSAAAAIFCRVDSAFMCLDCDSRIHSGnnklvsspH 61 579*****************************87655555555 PP
2	zf-B_box	26.3	1.6e-08	64	109	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ C+ + lC +C +H+ H++vp+ XP_022754006.1 64 VWICEVCEQAPAAVTCRADAAALCVTCDADIHSAnplarrHERVPV 109 689*****************************66899999999986 PP
3	CCT	69.9	6.4e-24	292	335	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+AesRpR+KGrF+k++ XP_022754006.1 292 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRT 335 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MGIEIGGVKG ITGGWGMPAK TCDTCKSAAA AIFCRVDSAF MCLDCDSRIH SGNNKLVSSP 60 HGRVWICEVC EQAPAAVTCR ADAAALCVTC DADIHSANPL ARRHERVPVE PFFDSADSIV 120 KSSPFSFLVP TDHDGTNCPQ EDVELGSWLL PNPNISSKLT METNQVKTGD LFFSEMDPFI 180 DLEFQNSFQQ HHNAAMDSVV PVQTKPATIP VINNFHCFDI DFCRSKLPTF NYQSQSLSHS 240 VSSSSLEVGV VPDGNSLSDI SYPFGRTMTD PSVPILATTI NNQAPQVGGI DREARVLRYR 300 EKRKNRKFEK TIRYASRKAY AESRPRIKGR FAKRTETDNE VDHMYNSPSA ATAAAFMSDT 360 QYGVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MGIEIGGVKG ITGGWGMPAK TCDTCKSAAA AIFCRVDSAF MCLDCDSRIH SGNNKLVSSP  60
HGRVWICEVC EQAPAAVTCR ADAAALCVTC DADIHSANPL ARRHERVPVE PFFDSADSIV  120
KSSPFSFLVP TDHDGTNCPQ EDVELGSWLL PNPNISSKLT METNQVKTGD LFFSEMDPFI  180
DLEFQNSFQQ HHNAAMDSVV PVQTKPATIP VINNFHCFDI DFCRSKLPTF NYQSQSLSHS  240
VSSSSLEVGV VPDGNSLSDI SYPFGRTMTD PSVPILATTI NNQAPQVGGI DREARVLRYR  300
EKRKNRKFEK TIRYASRKAY AESRPRIKGR FAKRTETDNE VDHMYNSPSA ATAAAFMSDT  360
QYGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-124	CO-like family protein