PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022754003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 429aa MW: 46867.6 Da PI: 7.1061 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 121.5 | 9.8e-38 | 36 | 140 | 3 | 105 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssaseceaesssssasnsss 87 g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai+el+++ + +++s+ +++++++ XP_022754003.1 36 GRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLITKAKPAIDELAELppwnpetlatT--------TSTSKPNNQEDQN 122 89*************************************************************76665555421........1222222222222 PP TCP 88 gkaaksaakskksqksaa 105 + +++a + + ++s + XP_022754003.1 123 TTTDNDKAYQFQIHHSGN 140 222222222233333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MGDSHHQAAT SSRLGIRHTG GDIVEVQGGH IVRSIGRKDR HSKVCTAKGP RDRRVRLSAH 60 TAIQFYDVQD RLGYDRPSKA VDWLITKAKP AIDELAELPP WNPETLATTT STSKPNNQED 120 QNTTTDNDKA YQFQIHHSGN LVENLAAGIF TRRRTATIMG NEVQSLQQQE MGDNPNNTSA 180 FLPPSLVSDE IADTIKSFFP LGASGGTPSS SIQFQNYPPD LLSRTSSHSQ DLRLSLQSFP 240 EPILLHQHYH QVPTAQAHHS EPVLFTGTNP LGGFDESSAG WEHHHRHQAE IGRFQRLAAW 300 NSSGGAADTG SGSGGSGGVG RFIFGTPSPQ PLPPTFGRNS QLFSQRGPLQ SSKTPLIRAR 360 IDQPISTIDE HQHHQIPQNI HHQAASCGIG CTTCSVFSGF RIPARIQGEE EEHDSITNKL 420 FSASSDSHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 1e-107 | TCP family protein |