PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022754003.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 429aa MW: 46867.6 Da PI: 7.1061

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022754003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.5	9.8e-38	36	140	3	105
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssaseceaesssssasnsss 87 g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai+el+++ + +++s+ +++++++ XP_022754003.1 36 GRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLITKAKPAIDELAELppwnpetlatT--------TSTSKPNNQEDQN 122 89*************************************************************76665555421........1222222222222 PP TCP 88 gkaaksaakskksqksaa 105 + +++a + + ++s + XP_022754003.1 123 TTTDNDKAYQFQIHHSGN 140 222222222233333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MGDSHHQAAT SSRLGIRHTG GDIVEVQGGH IVRSIGRKDR HSKVCTAKGP RDRRVRLSAH 60 TAIQFYDVQD RLGYDRPSKA VDWLITKAKP AIDELAELPP WNPETLATTT STSKPNNQED 120 QNTTTDNDKA YQFQIHHSGN LVENLAAGIF TRRRTATIMG NEVQSLQQQE MGDNPNNTSA 180 FLPPSLVSDE IADTIKSFFP LGASGGTPSS SIQFQNYPPD LLSRTSSHSQ DLRLSLQSFP 240 EPILLHQHYH QVPTAQAHHS EPVLFTGTNP LGGFDESSAG WEHHHRHQAE IGRFQRLAAW 300 NSSGGAADTG SGSGGSGGVG RFIFGTPSPQ PLPPTFGRNS QLFSQRGPLQ SSKTPLIRAR 360 IDQPISTIDE HQHHQIPQNI HHQAASCGIG CTTCSVFSGF RIPARIQGEE EEHDSITNKL 420 FSASSDSHH

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MGDSHHQAAT SSRLGIRHTG GDIVEVQGGH IVRSIGRKDR HSKVCTAKGP RDRRVRLSAH  60
TAIQFYDVQD RLGYDRPSKA VDWLITKAKP AIDELAELPP WNPETLATTT STSKPNNQED  120
QNTTTDNDKA YQFQIHHSGN LVENLAAGIF TRRRTATIMG NEVQSLQQQE MGDNPNNTSA  180
FLPPSLVSDE IADTIKSFFP LGASGGTPSS SIQFQNYPPD LLSRTSSHSQ DLRLSLQSFP  240
EPILLHQHYH QVPTAQAHHS EPVLFTGTNP LGGFDESSAG WEHHHRHQAE IGRFQRLAAW  300
NSSGGAADTG SGSGGSGGVG RFIFGTPSPQ PLPPTFGRNS QLFSQRGPLQ SSKTPLIRAR  360
IDQPISTIDE HQHHQIPQNI HHQAASCGIG CTTCSVFSGF RIPARIQGEE EEHDSITNKL  420
FSASSDSHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-107	TCP family protein