PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753949.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 429aa    MW: 46800.5 Da    PI: 9.6312
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00041196218223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C++Cg+ Fs ++  ++H  + H
  XP_022753949.1 196 TCHKCGEQFSKWEAAETHHLSkH 218
                     8*****************98877 PP

Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MPTVWFSLKR SLHCKSEPSG VHDPKTRKQL STILTRKASR SGCSRSIANL KDVIHGSKRH  60
LEKPPSCSPR SIGSSEFLNP ITHEVILSNS RCELKITGFG GLQAGVSNGG NKGVNDGGGG  120
GGSTFVGTLR PGTPGPGGHP TMHYFNSSLR NSSTTPPRKS HFLVSETEGS GFGGGNFHSN  180
NRVSLETDSN GCSKLTCHKC GEQFSKWEAA ETHHLSKHAV TELVEGDSSR KIVEIICRTS  240
WLKSENHCGR IERVLKVHNM QKTLARFEEY REMVKIKASK LPKKHPRCIA DGNELLRFYG  300
TTVACSLGLN GSSSLCISEK CCVCWIIRNG FSAKKELKEG IGVFTTSTSG RAFESIQILE  360
DDPSIRKALI VCRVIAGRVH RPLENKQEMA GQTGFDSLAG KVGLYSNIEE LYLFNPRALL  420
PCFVVICKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-124C2H2 family protein