PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022753949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 429aa MW: 46800.5 Da PI: 9.6312 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.6 | 0.00041 | 196 | 218 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cg+ Fs ++ ++H + H XP_022753949.1 196 TCHKCGEQFSKWEAAETHHLSkH 218 8*****************98877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MPTVWFSLKR SLHCKSEPSG VHDPKTRKQL STILTRKASR SGCSRSIANL KDVIHGSKRH 60 LEKPPSCSPR SIGSSEFLNP ITHEVILSNS RCELKITGFG GLQAGVSNGG NKGVNDGGGG 120 GGSTFVGTLR PGTPGPGGHP TMHYFNSSLR NSSTTPPRKS HFLVSETEGS GFGGGNFHSN 180 NRVSLETDSN GCSKLTCHKC GEQFSKWEAA ETHHLSKHAV TELVEGDSSR KIVEIICRTS 240 WLKSENHCGR IERVLKVHNM QKTLARFEEY REMVKIKASK LPKKHPRCIA DGNELLRFYG 300 TTVACSLGLN GSSSLCISEK CCVCWIIRNG FSAKKELKEG IGVFTTSTSG RAFESIQILE 360 DDPSIRKALI VCRVIAGRVH RPLENKQEMA GQTGFDSLAG KVGLYSNIEE LYLFNPRALL 420 PCFVVICKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27240.1 | 1e-124 | C2H2 family protein |