PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022753904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NF-YB | ||||||||
Protein Properties | Length: 177aa MW: 20048.7 Da PI: 5.3044 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 168.8 | 6.3e-53 | 8 | 103 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqd+++Pianv+rim+++lPa+akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d++wa+++lGf++yvepl+v+l++yre+e+e XP_022753904.1 8 HEQDQYMPIANVIRIMRRILPAHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVVWAMGKLGFDEYVEPLTVFLTRYRETENE 102 79*******************************************************************************************99 PP NF-YB 97 k 97 k XP_022753904.1 103 K 103 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MPPPCMVHEQ DQYMPIANVI RIMRRILPAH AKISDDAKET IQECVSEYIS FITGEANERC 60 QREQRKTITA EDVVWAMGKL GFDEYVEPLT VFLTRYRETE NEKTSLRGEP IFKRGIDYGQ 120 MMMAPYGPAF HMENHQGIFD AARAVGGYYY RDASGAGAGS SSQASLTNNF DPFGQFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 1e-64 | NF-YB family protein |