PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753895.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 439aa    MW: 49590.1 Da    PI: 6.4312
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS417.11.5e-127484391374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykal...ppsetseknsseelaal......kl.. 83 
                     +++lL++cAe vs++d+ +a++lL+ ls ++sp+gd+++Rla+ ft+AL+ r++r ++++    +   ++  ++  +s+ ++a +      +   
  XP_022753895.1  48 MRQLLISCAELVSQSDFPAANRLLSILSSNSSPYGDSTERLAHQFTKALSLRINRlHGPGNLLMMvniNSPIAAAATSTATIANYdidpslQScy 142
                     589***************************************************97666533333111222222233555555554445441145 PP

            GRAS  84 ..fsevsPilkfshltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAee 171
                       +++++P+++f+hltaNqaIlea++ e + +Hi+Dfdi++G+QWp+L+qaLa+R+    ++pp+lRiTg g+    + + l++tg+rL kfA++
  XP_022753895.1 143 lsLNQITPFIRFAHLTANQAILEAIQVEqQSIHILDFDIMHGVQWPPLMQALAERSanslHPPPMLRITGTGH----DLNILHRTGDRLFKFAQS 233
                     67************************99899*************************888888***********....9***************** PP

            GRAS 172 lgvpfefnvl..vakrledl...eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleal 261
                     lg++f+f++l  + ++ +++    +++  + p+Eal+Vn++l lhrll+++       + +L+ +k l+P vv+++e+ea+hn++ Fl+rf+eal
  XP_022753895.1 234 LGLRFQFHPLlvLNDDPTSVainLPSMVTILPDEALVVNCMLYLHRLLKDDSRDL---RLFLHNIKALNPAVVTIAEREANHNHPLFLQRFVEAL 325
                     *********96422222222222567889999****************6665554...59*********************************** PP

            GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveees 355
                     +yy a+fdslea+lp++s+er  +E+ ++greiv++va+eg++r+erhe+le+W+++l+++GF++vpls++a +qaklllr ++ s+gy+++  +
  XP_022753895.1 326 DYYXAIFDSLEATLPPNSRERLAMEQIWFGREIVDIVAAEGENRIERHERLETWEMMLRSSGFSNVPLSSFAHSQAKLLLRLHYpSEGYQLQILN 420
                     *********************************************************************************************** PP

            GRAS 356 gslvlgWkdrpLvsvSaWr 374
                     +s++lgW++r+L+svS+Wr
  XP_022753895.1 421 NSFYLGWQNRALFSVSSWR 439
                     ******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MLGSLNLTSN DQEEDDPSAP DLQHHPQQQP SHSTGFTSHS YSHQAIHMRQ LLISCAELVS  60
QSDFPAANRL LSILSSNSSP YGDSTERLAH QFTKALSLRI NRLHGPGNLL MMVNINSPIA  120
AAATSTATIA NYDIDPSLQS CYLSLNQITP FIRFAHLTAN QAILEAIQVE QQSIHILDFD  180
IMHGVQWPPL MQALAERSAN SLHPPPMLRI TGTGHDLNIL HRTGDRLFKF AQSLGLRFQF  240
HPLLVLNDDP TSVAINLPSM VTILPDEALV VNCMLYLHRL LKDDSRDLRL FLHNIKALNP  300
AVVTIAEREA NHNHPLFLQR FVEALDYYXA IFDSLEATLP PNSRERLAME QIWFGREIVD  360
IVAAEGENRI ERHERLETWE MMLRSSGFSN VPLSSFAHSQ AKLLLRLHYP SEGYQLQILN  420
NSFYLGWQNR ALFSVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-134GRAS family protein