PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022753765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 327aa MW: 37339.7 Da PI: 8.7851 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.7 | 2e-05 | 167 | 186 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ XP_022753765.1 167 FACSICSKTFNRYNNMQMHM 186 78*****************9 PP | |||||||
2 | zf-C2H2 | 10.9 | 0.0014 | 251 | 273 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+ k + ++H +++ XP_022753765.1 251 FMCRKCGKTLAVKGDWRTHEKNC 273 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MKMGFRSYHL AEDKNSCFQA PTFIEWLKPS SPVTQQVQLI NPMTILKLPA VSFQQQQQDH 60 QQLGQETIQC LPLLSRLTEN KPLEEEDAGT KKEMSFGNVK EEKIEKVTVS LHIGLPNSTT 120 GDNPVAENKN FKEEEPIKKT FHGCSFNTES RFWIPTPAQI LVGPMQFACS ICSKTFNRYN 180 NMQMHMWGHG SEYRKGPDSL KGTQPAAMLR LPCYCCAQGC KNNINHPRAK PLKDFRTLQT 240 HYKRKHGAKP FMCRKCGKTL AVKGDWRTHE KNCGKLWYCT CGSDFKHKRS LKDHIRSFGK 300 GHSPHPSLEG FEDDKDCITG SEDEFTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08290.1 | 1e-126 | C2H2 family protein |