PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022753765.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 327aa    MW: 37339.7 Da    PI: 8.7851
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022753765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.72e-05167186120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     + C++C+k+F+r  n++ H+
  XP_022753765.1 167 FACSICSKTFNRYNNMQMHM 186
                     78*****************9 PP

2zf-C2H210.90.0014251273123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C +Cgk+   k + ++H +++
  XP_022753765.1 251 FMCRKCGKTLAVKGDWRTHEKNC 273
                     89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MKMGFRSYHL AEDKNSCFQA PTFIEWLKPS SPVTQQVQLI NPMTILKLPA VSFQQQQQDH  60
QQLGQETIQC LPLLSRLTEN KPLEEEDAGT KKEMSFGNVK EEKIEKVTVS LHIGLPNSTT  120
GDNPVAENKN FKEEEPIKKT FHGCSFNTES RFWIPTPAQI LVGPMQFACS ICSKTFNRYN  180
NMQMHMWGHG SEYRKGPDSL KGTQPAAMLR LPCYCCAQGC KNNINHPRAK PLKDFRTLQT  240
HYKRKHGAKP FMCRKCGKTL AVKGDWRTHE KNCGKLWYCT CGSDFKHKRS LKDHIRSFGK  300
GHSPHPSLEG FEDDKDCITG SEDEFTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08290.11e-126C2H2 family protein