PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753708.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SRS

Protein Properties

Length: 347aa MW: 36052.9 Da PI: 8.3448

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	221.5	1.7e-68	132	292	3	153
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaes 96 s +a+CqdCGnqakkdC+h+RCRtCCksrgfdC thvkstWvpaa+rrerq ++aaa++ a s+ +++ sk++r +++++++s+t++s++++ XP_022753708.1 132 SSGATCQDCGNQAKKDCTHRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMTAAATTVGAGSSgSTSGSKKPRLV-TSQTTTTSHTSTSNTTP 225 56789********************************************99999988877777477777888865.88999999***** PP DUF702 97 kkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 +++++tss lP +v+++a+f+cvrv++v+dge+e+aYq++v+igGhvfkG+LydqG+e XP_022753708.1 226 PRSFDTSSshqdagfkeaLPGQVRAPALFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGVLYDQGVE 292 **999******************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGMVGLRDFV VVAPASFNHH QHHHHHHTQD LIMANDQING PNAAPALGVG VIPLLTAAPC 60 LAPQNVEDSD LLNNNGRNKL SGMQLWQNQN SSPHYLKKPS SLPDNNNSFS MNLIQSSGGG 120 AMGGGSGGSG SSSGATCQDC GNQAKKDCTH RRCRTCCKSR GFDCPTHVKS TWVPAARRRE 180 RQLMTAAATT VGAGSSGSTS GSKKPRLVTS QTTTTSHTST SNTTPPRSFD TSSSHQDAGF 240 KEALPGQVRA PALFKCVRVT AVEDGEDEYA YQAVVKIGGH VFKGVLYDQG VEGRDGFPNI 300 SELHLGGGGG GGRNGGSSSS PVLDPSEVYA TTGGGLLGGS GYGNPIN

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGMVGLRDFV VVAPASFNHH QHHHHHHTQD LIMANDQING PNAAPALGVG VIPLLTAAPC  60
LAPQNVEDSD LLNNNGRNKL SGMQLWQNQN SSPHYLKKPS SLPDNNNSFS MNLIQSSGGG  120
AMGGGSGGSG SSSGATCQDC GNQAKKDCTH RRCRTCCKSR GFDCPTHVKS TWVPAARRRE  180
RQLMTAAATT VGAGSSGSTS GSKKPRLVTS QTTTTSHTST SNTTPPRSFD TSSSHQDAGF  240
KEALPGQVRA PALFKCVRVT AVEDGEDEYA YQAVVKIGGH VFKGVLYDQG VEGRDGFPNI  300
SELHLGGGGG GGRNGGSSSS PVLDPSEVYA TTGGGLLGGS GYGNPIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	9e-83	SRS family protein