PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022753605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 190aa MW: 20923.9 Da PI: 9.2244 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 105.5 | 8.5e-33 | 32 | 123 | 5 | 66 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............................s 66 ++ ++++h+kv+gRdRR+Rl+ caar+F+L++eLG+++d++ti WLl+qa+p+i+++tgt XP_022753605.1 32 RKITKDRHAKVDGRDRRIRLPPICAARIFQLTRELGYKTDGETIAWLLRQAEPSIIAATGTgialpssspvlsnptslvpfssepplllsdY 123 5679*********************************************************7755544444433333333333333332222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MASKNMSLEM ALSNASTRKR RPFSQNKLVT SRKITKDRHA KVDGRDRRIR LPPICAARIF 60 QLTRELGYKT DGETIAWLLR QAEPSIIAAT GTGIALPSSS PVLSNPTSLV PFSSEPPLLL 120 SDYSPSSNSC KPKVVPDNQD TLKNCVVSRA EPTLPPFEFD LVANFELEFS PNEIAMLQSV 180 TGSYDKEGKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 3e-32 | TCP family protein |