PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022753564.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 688aa MW: 79901.7 Da PI: 7.0476

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022753564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.5	3.4e-26	29	114	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y+eYAk+vGF + k +s++s+ ++e+++++f+C ++g++++++++ ++r++ ++gCka+++vk+++dgkw+v+++ ++HnHel p XP_022753564.1 29 YYKEYAKSVGFGTAKLSSRRSRVSKEFIDAKFTCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRQDGKWYVYSFIKDHNHELLP 114 9*************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MESTISSSDS ILELQPGLEF ESHEAAYSYY KEYAKSVGFG TAKLSSRRSR VSKEFIDAKF 60 TCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRQDGKWY VYSFIKDHNH ELLPAQAHFF 120 RSHRNVDPLK NDVGRRRKNV AAVSKPFSVY LNFDFLEGYM RNQHDKGRCL VLEEGDAQVL 180 LELFMHMQEE NPKFFYAVDL NEEHRLRNVF WVDAKGMEDF SKFGDVVSFD TTYFTNKYKI 240 PLVLFIGVNH HIQPTLLGCA LIADETVYTF LWLMQTWFVA MGECAPRVML TDQNNAIKAA 300 VAAVFPNTRH CFCLWHVLEK LPRHLEYLSL WHDSVMQNFN KCIYQSWTEE QFEKRWWKMV 360 DKFHLREMQW IQSLYEDRKQ WVPAFMRDIS FAGLSTALRS DCLNSSFDKY VHGETSLRDF 420 IEQYRIILED RYEEEAKADF NAWHETPELK SPSPFEKQIS LVYTHEIFKK FQVEVLGAAA 480 CHLKKENEDQ SSATYSVKDF EDNLNYMVEW NQSKSDIYCS CHSFEYKGYL CRHAIVVLQM 540 SGVFSIPSKY ILQRWTNAAL SRHPISQKLD EVQSKVRRYS DLCRRAIILS EEGSLSQESY 600 NLAVSAIKEA LKQCVSVNNS VENDVIPNTS MVHAVSGVEG HNQCVNAPEE KPPDPRMANT 660 IKTSQSVEAA FERQINENNA TRKGKLLL

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MESTISSSDS ILELQPGLEF ESHEAAYSYY KEYAKSVGFG TAKLSSRRSR VSKEFIDAKF  60
TCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRQDGKWY VYSFIKDHNH ELLPAQAHFF  120
RSHRNVDPLK NDVGRRRKNV AAVSKPFSVY LNFDFLEGYM RNQHDKGRCL VLEEGDAQVL  180
LELFMHMQEE NPKFFYAVDL NEEHRLRNVF WVDAKGMEDF SKFGDVVSFD TTYFTNKYKI  240
PLVLFIGVNH HIQPTLLGCA LIADETVYTF LWLMQTWFVA MGECAPRVML TDQNNAIKAA  300
VAAVFPNTRH CFCLWHVLEK LPRHLEYLSL WHDSVMQNFN KCIYQSWTEE QFEKRWWKMV  360
DKFHLREMQW IQSLYEDRKQ WVPAFMRDIS FAGLSTALRS DCLNSSFDKY VHGETSLRDF  420
IEQYRIILED RYEEEAKADF NAWHETPELK SPSPFEKQIS LVYTHEIFKK FQVEVLGAAA  480
CHLKKENEDQ SSATYSVKDF EDNLNYMVEW NQSKSDIYCS CHSFEYKGYL CRHAIVVLQM  540
SGVFSIPSKY ILQRWTNAAL SRHPISQKLD EVQSKVRRYS DLCRRAIILS EEGSLSQESY  600
NLAVSAIKEA LKQCVSVNNS VENDVIPNTS MVHAVSGVEG HNQCVNAPEE KPPDPRMANT  660
IKTSQSVEAA FERQINENNA TRKGKLLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein