PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022752819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | FAR1 | ||||||||
Protein Properties | Length: 870aa MW: 98128.9 Da PI: 6.8739 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 53.1 | 1e-16 | 56 | 128 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +Y+eY++++GFs + + ++sk++g+i+ r+fvCs+eg ++++ ++ C+a+l+++++ +kw+vtk+++eH+H + XP_022752819.1 56 YYDEYGRRMGFSSKAGQLTRSKTDGTIVAREFVCSREGLKRRSADS--------------CDAMLRIELK-GDKWVVTKFVKEHSHLV 128 8**************************************9998877..............**********.9**************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 870 aa Download sequence |
MDVHVIDSEE GMSHRGMSDD GDAEPGESGE ANHDEDGISE PYVGMEFGSE DAGKTYYDEY 60 GRRMGFSSKA GQLTRSKTDG TIVAREFVCS REGLKRRSAD SCDAMLRIEL KGDKWVVTKF 120 VKEHSHLVMS PSKVHYLRPR RHFAGAAKTM PDSYQGVGIV PSGVMYVSMD GNRVSMDANN 180 RGVRSTPPAE ANRAVKNIGT PNYTVRPVNR KRTLGKDAQN LLDYFKKMQA ENPGFFYAIQ 240 LDDDNHMANV FWADARSRTA YMHFGDAVKL DTSCRVNQYR VPFAPFSGLN HHGQTILFGC 300 ALLLDDSEAS FVWLFKTFLT AMNDRQPVSL ITDQDRAIQI AVSQVFTGVR HCINKWHVLR 360 EGPEKLAHIC HVHPNFQVEL YNCINLTETI EEFELSWSSI IEKYKLSAHD WLQSLYSARA 420 QWVPAYFRDS FFAAISPNQG FDGSFFYGYV NQQTTIPMFF RQYERAIENW FEREIEADFD 480 TICTTPLLRT PSPMEKQAAN LYTRKIFTKF QEELVETFVY TANRIEGDGA ISTFRVAKFE 540 DDNKAYIVTL NYPEMRANCS CQMFEYSGIL CRHVLTVFTV TNVLTLPSHY ILKRWTRNAK 600 SGVGTDERGG ELPCQECLTA RYNSLCREAI KYAEDGAIAT ETYNVAMGAL KEGAKKVSVV 660 KKNVAPPGQA SGAAYNDRKS SNSAPDTAPL LWPQQDEISR RFNLNDTGAP AQSVSDLNLP 720 RMAPVFLHRD DSLPDTMPVL PCLKSMTWVM ENKNPTSGNR VAVINLKLQD YSKNPSAESE 780 VKFQLSRVTL EPMLRSMAYI SEQLSTPANR VAVINLKLQD TEPTTGESEV KFQVSRDTLG 840 AMLRSMAYIR EQLSNVSEPQ AEPLSKKHRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27110.2 | 0.0 | FAR1 family protein |