PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752818.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family FAR1
Protein Properties Length: 870aa    MW: 98128.9 Da    PI: 6.8739
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR153.11e-1656128289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +Y+eY++++GFs +  + ++sk++g+i+ r+fvCs+eg ++++ ++              C+a+l+++++  +kw+vtk+++eH+H +
  XP_022752818.1  56 YYDEYGRRMGFSSKAGQLTRSKTDGTIVAREFVCSREGLKRRSADS--------------CDAMLRIELK-GDKWVVTKFVKEHSHLV 128
                     8**************************************9998877..............**********.9**************76 PP

Sequence ? help Back to Top
Protein Sequence    Length: 870 aa     Download sequence    
MDVHVIDSEE GMSHRGMSDD GDAEPGESGE ANHDEDGISE PYVGMEFGSE DAGKTYYDEY  60
GRRMGFSSKA GQLTRSKTDG TIVAREFVCS REGLKRRSAD SCDAMLRIEL KGDKWVVTKF  120
VKEHSHLVMS PSKVHYLRPR RHFAGAAKTM PDSYQGVGIV PSGVMYVSMD GNRVSMDANN  180
RGVRSTPPAE ANRAVKNIGT PNYTVRPVNR KRTLGKDAQN LLDYFKKMQA ENPGFFYAIQ  240
LDDDNHMANV FWADARSRTA YMHFGDAVKL DTSCRVNQYR VPFAPFSGLN HHGQTILFGC  300
ALLLDDSEAS FVWLFKTFLT AMNDRQPVSL ITDQDRAIQI AVSQVFTGVR HCINKWHVLR  360
EGPEKLAHIC HVHPNFQVEL YNCINLTETI EEFELSWSSI IEKYKLSAHD WLQSLYSARA  420
QWVPAYFRDS FFAAISPNQG FDGSFFYGYV NQQTTIPMFF RQYERAIENW FEREIEADFD  480
TICTTPLLRT PSPMEKQAAN LYTRKIFTKF QEELVETFVY TANRIEGDGA ISTFRVAKFE  540
DDNKAYIVTL NYPEMRANCS CQMFEYSGIL CRHVLTVFTV TNVLTLPSHY ILKRWTRNAK  600
SGVGTDERGG ELPCQECLTA RYNSLCREAI KYAEDGAIAT ETYNVAMGAL KEGAKKVSVV  660
KKNVAPPGQA SGAAYNDRKS SNSAPDTAPL LWPQQDEISR RFNLNDTGAP AQSVSDLNLP  720
RMAPVFLHRD DSLPDTMPVL PCLKSMTWVM ENKNPTSGNR VAVINLKLQD YSKNPSAESE  780
VKFQLSRVTL EPMLRSMAYI SEQLSTPANR VAVINLKLQD TEPTTGESEV KFQVSRDTLG  840
AMLRSMAYIR EQLSNVSEPQ AEPLSKKHRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27110.20.0FAR1 family protein