PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022752808.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 271aa MW: 30310.5 Da PI: 9.3066 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.5 | 1.2e-16 | 156 | 205 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f ta Aa+a+++a+ k++g XP_022752808.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFETAHAAARAYDRAAIKFRG 205 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MLDLNLKVAS TELTQDSDSV APFTSKLNEG SGNQMDESGT SNSSIVNDDD ESCYTRANRD 60 AFTLSFDILK VGRGGSENRN DDTAAVVTKE LFPVKGLEAD FGSSEGQSSG NSNNNNKWID 120 LSFDKKEAGD SRVMQQQPSQ TVTVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFETAH AAARAYDRAA IKFRGVDADI NFSLSDYEDM KQMKNLTKEE FVHILRRQST 240 GFSRGSSKYR GVTLHKCGRW EARMGQFLGK K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 2e-93 | AP2 family protein |