PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752806.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 494aa MW: 54388.2 Da PI: 6.3633

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.3	2.9e-16	156	205	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f ta Aa+a+++a+ k++g XP_022752806.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFETAHAAARAYDRAAIKFRG 205 78*****************......55**********************997 PP
2	AP2	40.5	6.8e-13	247	297	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+a+++a+ k +g XP_022752806.1 247 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAARAYDKAAIKHNG 297 89******.7**5553..2.26******99********99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MLDLNLKVAS TELTQDSDSV APFTSKLNEG SGNQMDESGT SNSSIVNDDD ESCYTRANRD 60 AFTLSFDILK VGRGGSENRN DDTAAVVTKE LFPVKGLEAD FGSSEGQSSG NSNNNNKWID 120 LSFDKKEAGD SRVMQQQPSQ TVTVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFETAH AAARAYDRAA IKFRGVDADI NFSLSDYEDM KQMKNLTKEE FVHILRRQST 240 GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KYIYLGLFDN EVEAARAYDK AAIKHNGREA 300 VTNFEPSTYE GEMIFDTSNE GDTHNLDLNL GISPPVGNDP NEKEGHLDFL SGPYDMHGMK 360 SLRAENPAAA TVGPAFNGLA GTSDHPIFWN SGYPRFFPSE ERAMVNRVES CPPQGLPDWA 420 LQMRGQVSAT PLPLFSSAAS SGFSFSATPL TAAILPSSKP LNPTTHSLCF ASSTATATNI 480 PQTYFQIKPQ QEPP

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MLDLNLKVAS TELTQDSDSV APFTSKLNEG SGNQMDESGT SNSSIVNDDD ESCYTRANRD  60
AFTLSFDILK VGRGGSENRN DDTAAVVTKE LFPVKGLEAD FGSSEGQSSG NSNNNNKWID  120
LSFDKKEAGD SRVMQQQPSQ TVTVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ  180
VYLGGFETAH AAARAYDRAA IKFRGVDADI NFSLSDYEDM KQMKNLTKEE FVHILRRQST  240
GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KYIYLGLFDN EVEAARAYDK AAIKHNGREA  300
VTNFEPSTYE GEMIFDTSNE GDTHNLDLNL GISPPVGNDP NEKEGHLDFL SGPYDMHGMK  360
SLRAENPAAA TVGPAFNGLA GTSDHPIFWN SGYPRFFPSE ERAMVNRVES CPPQGLPDWA  420
LQMRGQVSAT PLPLFSSAAS SGFSFSATPL TAAILPSSKP LNPTTHSLCF ASSTATATNI  480
PQTYFQIKPQ QEPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-132	AP2 family protein