PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752658.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 383aa MW: 42575.9 Da PI: 8.8327

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	6.9e-05	145	168	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F ++ L++H+ t H XP_022752658.1 145 FPCTVCGEIFQKPHFLEQHQATkH 168 89******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MAKTNIESYF NRFLSLFILL LHLGCFVFTA KDLQKPTKKR KSSPLSPSHK PHKLAVSSTW 60 SYLKRILSSS KANCKNTIQT HPATATTPAL TSARNSLQSL VSMIIPPQTH LLDSPPPRHK 120 KQSGSCPESD ISSDNQFFPL RNDIFPCTVC GEIFQKPHFL EQHQATKHAV SELIDGDSGN 180 NVVRIIFKTG WTDKVKNHEI HRILKIHNSP KILARFEEYR ELVKAKAGRN GAIGRRDERC 240 IADGNELLRF YCSTFMCDLG LNGSSGICNQ QFCSICGIIK SGFSPKMDGI STLSTSWRAH 300 VAIPEDLEEE FKFLNVKRAM LVCRVVAGRI GSEGEEIDKE DGGFDSVIGR GGGSGAHTKL 360 DEEELLVFNP RAVLPCFVIV YTV

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MAKTNIESYF NRFLSLFILL LHLGCFVFTA KDLQKPTKKR KSSPLSPSHK PHKLAVSSTW  60
SYLKRILSSS KANCKNTIQT HPATATTPAL TSARNSLQSL VSMIIPPQTH LLDSPPPRHK  120
KQSGSCPESD ISSDNQFFPL RNDIFPCTVC GEIFQKPHFL EQHQATKHAV SELIDGDSGN  180
NVVRIIFKTG WTDKVKNHEI HRILKIHNSP KILARFEEYR ELVKAKAGRN GAIGRRDERC  240
IADGNELLRF YCSTFMCDLG LNGSSGICNQ QFCSICGIIK SGFSPKMDGI STLSTSWRAH  300
VAIPEDLEEE FKFLNVKRAM LVCRVVAGRI GSEGEEIDKE DGGFDSVIGR GGGSGAHTKL  360
DEEELLVFNP RAVLPCFVIV YTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	1e-111	C2H2 family protein