PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022752610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 295aa MW: 31538.1 Da PI: 4.5672 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.8 | 1.8e-05 | 269 | 292 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+ksF + L++H + H XP_022752610.1 269 FSCGSCNKSFGTEGGLESHKKAkH 292 89*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MEFWGIEVKA GQPIKTDPGA SYVIHLSQAS LGESKNKTES VPLYVNADGK KLVLGTLSHQ 60 NCPQLSFDLV FDKDFELSHN WKNGSVYFLG YKTFVPEEGD DELDMSSEEE GSGDEEPPVA 120 AAENGKAKAD AKTAKANAGK PDAVKQAVKI EEPSNNKKSE DGDDNSHSED ESGSDEEDDS 180 EDEDESDERN LNFLFSGQMS MDESSDDEDE ETPKKVESSK KRPAEAATPV SAKKAKSADG 240 KKGGHTATPH PSKQAGKTSA KSPKSGGQFS CGSCNKSFGT EGGLESHKKA KHGGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 9e-37 | C2H2 family protein |