PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022752609.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 296aa MW: 31639.2 Da PI: 4.5672 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.8 | 1.9e-05 | 270 | 293 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+ksF + L++H + H XP_022752609.1 270 FSCGSCNKSFGTEGGLESHKKAkH 293 89*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MEFWGIEVKA GQPIKTDPGA SYVIHLSQAS LGESKNKTES VPLYVNADGK KLVLGTLSHQ 60 NCPQLSFDLV FDKDFELSHN WKNGSVYFLG YKTFVPEEGT DDELDMSSEE EGSGDEEPPV 120 AAAENGKAKA DAKTAKANAG KPDAVKQAVK IEEPSNNKKS EDGDDNSHSE DESGSDEEDD 180 SEDEDESDER NLNFLFSGQM SMDESSDDED EETPKKVESS KKRPAEAATP VSAKKAKSAD 240 GKKGGHTATP HPSKQAGKTS AKSPKSGGQF SCGSCNKSFG TEGGLESHKK AKHGGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 1e-36 | C2H2 family protein |