PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022752245.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 538aa    MW: 59954.4 Da    PI: 6.7606
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022752245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.55e-054668123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ Cgk F +   L  H+r H
  XP_022752245.1 46 FQCKACGKEFESMKALFGHMRHH 68
                    89*******************99 PP

2zf-C2H2120.000637898323
                    ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                    C+ Cg+ F +   ++ H+++H
  XP_022752245.1 78 CQECGRKFQSLKAFTGHMKLH 98
                    *******************99 PP

3zf-C2H214.10.00014371393123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC +C+k+F+++  L  H+  H
  XP_022752245.1 371 YKCRICSKTFRSHQALGGHQTIH 393
                     9***************9999888 PP

Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    
MEKNSGKRKA KEDMDFQGYC LRGNPKKSWK SLGFADDGTT SSMVKFQCKA CGKEFESMKA  60
LFGHMRHHSR RERKGVNCQE CGRKFQSLKA FTGHMKLHPV KLRVLGESGS GSLRQDLALE  120
SITVRRKRSN RMRYNNAPNS SLSSLNETYS AVEIDQELED AALCLVMLSR GVRNWSEFNS  180
FWESCDNNSD YSEIKSLNQN KEIMLNPFCD GDESFQMKKP RVDNSDSDVL ASMNVFCEKN  240
ISECKELDSG IMSADKEKKV GSEAPSDMLC SGVESRVSKV DDESGFQLYD TEIEERISGE  300
MMTFRSIEVE PGQDLMEGWD LAGLGSTKSS SCKDAMFVAC DADPGGDSLN KFVSTPMNSE  360
MSDDSQKKNK YKCRICSKTF RSHQALGGHQ TIHRKSNSCT VEEIENCEKI TQSSRSPEFE  420
ASLKLVKIEN VDNSVVQEMN GATSYGTRVY KVHKCRICLK VFGSGQALGG HKRSHSLKDS  480
ETSEKQPAKQ PQYSDISDVI DLNLPVMHNE EAKGDTGFKS CGVGNDCKSE ALLSLVAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.14e-18C2H2 family protein