PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022752245.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 538aa MW: 59954.4 Da PI: 6.7606 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.5 | 5e-05 | 46 | 68 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F + L H+r H XP_022752245.1 46 FQCKACGKEFESMKALFGHMRHH 68 89*******************99 PP | |||||||
2 | zf-C2H2 | 12 | 0.00063 | 78 | 98 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg+ F + ++ H+++H XP_022752245.1 78 CQECGRKFQSLKAFTGHMKLH 98 *******************99 PP | |||||||
3 | zf-C2H2 | 14.1 | 0.00014 | 371 | 393 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC +C+k+F+++ L H+ H XP_022752245.1 371 YKCRICSKTFRSHQALGGHQTIH 393 9***************9999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 538 aa Download sequence |
MEKNSGKRKA KEDMDFQGYC LRGNPKKSWK SLGFADDGTT SSMVKFQCKA CGKEFESMKA 60 LFGHMRHHSR RERKGVNCQE CGRKFQSLKA FTGHMKLHPV KLRVLGESGS GSLRQDLALE 120 SITVRRKRSN RMRYNNAPNS SLSSLNETYS AVEIDQELED AALCLVMLSR GVRNWSEFNS 180 FWESCDNNSD YSEIKSLNQN KEIMLNPFCD GDESFQMKKP RVDNSDSDVL ASMNVFCEKN 240 ISECKELDSG IMSADKEKKV GSEAPSDMLC SGVESRVSKV DDESGFQLYD TEIEERISGE 300 MMTFRSIEVE PGQDLMEGWD LAGLGSTKSS SCKDAMFVAC DADPGGDSLN KFVSTPMNSE 360 MSDDSQKKNK YKCRICSKTF RSHQALGGHQ TIHRKSNSCT VEEIENCEKI TQSSRSPEFE 420 ASLKLVKIEN VDNSVVQEMN GATSYGTRVY KVHKCRICLK VFGSGQALGG HKRSHSLKDS 480 ETSEKQPAKQ PQYSDISDVI DLNLPVMHNE EAKGDTGFKS CGVGNDCKSE ALLSLVAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45120.1 | 4e-18 | C2H2 family protein |