PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022752098.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 226aa MW: 26168.9 Da PI: 10.0512 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.4 | 4.4e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k ien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+e++s XP_022752098.1 9 KLIENSTNRQVTYSKRRNGLFKKANELTVLCDARVSIIMFSSTGKLHEFIS 59 569**********************************************86 PP | |||||||
2 | K-box | 89.3 | 7.2e-30 | 71 | 169 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yq++ g + ++++ e++q++l+ Lk+ ++nL++++R+++G++L++Ls+k+L+ Leq++e+s k +R++K++++ +qie+ +kk+++ + ++k+L XP_022752098.1 71 YQRTLGIDIWNTHFEKMQEQLKHLKEVNRNLRKQIRQRMGDCLNDLSIKDLRGLEQEMESSAKLVRERKYRVFSNQIETFRKKMRNEEGIHKNLL 165 677778899*************************************************************************************9 PP K-box 96 kkle 99 ++l+ XP_022752098.1 166 HELD 169 9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MARGKIQIKL IENSTNRQVT YSKRRNGLFK KANELTVLCD ARVSIIMFSS TGKLHEFISP 60 STSTKQIIDQ YQRTLGIDIW NTHFEKMQEQ LKHLKEVNRN LRKQIRQRMG DCLNDLSIKD 120 LRGLEQEMES SAKLVRERKY RVFSNQIETF RKKMRNEEGI HKNLLHELDA IKEDPYGLVD 180 NGGDYDTLIG YQNRGPRVFA LSLQPNHPNL HSAGGGSDLT TYPLLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 1e-101 | MIKC_MADS family protein |