PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022752093.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 180aa MW: 20478.8 Da PI: 9.8268 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 21 | 70 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykG+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g XP_022752093.1 21 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVFYLRG 70 59*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MENGTGVVAS RESSRKSAER PYKGIRMRKW GKWVAEIREP NKRSRIWLGS YSTPVAAARA 60 YDTAVFYLRG PSARLNFPDL LEGEKVGGGS LGGDLSAAYI RKKAVEVGAR VDALEVAHHH 120 HHHHHHHHHH HHNHGHSYKL NQNYNRSYGD ELKPSGGFLQ RVDLNKMPDP EDSDDEWEKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67190.1 | 3e-54 | ERF family protein |