PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022752061.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 608aa MW: 65632.3 Da PI: 8.7307

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022752061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.1	1.5e-23	232	276	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++r r+rsrk++e XP_022752061.1 232 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRVRHRSRKPVEG 276 79****************************************985 PP
2	QLQ	49.1	1.7e-17	162	198	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+ +L++Q+l+ Ky+ an+PvP++Ll +++k XP_022752061.1 162 GPFTPSQWIELEHQALICKYITANVPVPSNLLIPLKK 198 59*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MDFGVLGLEG IVGPGSGAPS QAQPPPPPFL SAEAKPKLVG SGFTKQERSS DSAEDLRKSS 60 KLPRTDDLST PKTMPLHQGS SLLRSNSLVS ATTRQQEHMV SFSSLKSEVP FISKDGVFLE 120 RSTQNSGFSY YQYTPSTYTR NMGFGTGSMN ASMHGPLTAI GGPFTPSQWI ELEHQALICK 180 YITANVPVPS NLLIPLKKSL YTYGLISSSV GSLPHKSLGW GPFHLGYSGS TDPEPGRCRR 240 TDGKKWRCSR DAVADQKYCE RHINRVRHRS RKPVEGQTGH AVSGTTNSKV VPMSASMSAS 300 VITSGGASNC LAIAQHQFKN LQSGVANPSA NTLVNRIQDT RGLSLMSFAS NLKSNNSTFT 360 ITKQGVPIAE SSQSDFGHVA SDSFVNPSHR GSYMNSKEYG LFLDFTDQET QDQNPLHQFI 420 DDWPKDQSSR SVITWPEEIK SDWTQLSMSI PMASSEFSSS SSSPAQDKRV LSPLRLSREF 480 DPIQMGLAMN SEISDQNKNQ AHWIPISWGS SMGGPLGEVL TYTTSNVGSW KNPSALSLLS 540 EGWDGSQHME SSPTGVLQKA PWASLSNSSS GSGPIAENKK PHDGASLCNN VLSSTLVSSA 600 LIPSVIRS

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MDFGVLGLEG IVGPGSGAPS QAQPPPPPFL SAEAKPKLVG SGFTKQERSS DSAEDLRKSS  60
KLPRTDDLST PKTMPLHQGS SLLRSNSLVS ATTRQQEHMV SFSSLKSEVP FISKDGVFLE  120
RSTQNSGFSY YQYTPSTYTR NMGFGTGSMN ASMHGPLTAI GGPFTPSQWI ELEHQALICK  180
YITANVPVPS NLLIPLKKSL YTYGLISSSV GSLPHKSLGW GPFHLGYSGS TDPEPGRCRR  240
TDGKKWRCSR DAVADQKYCE RHINRVRHRS RKPVEGQTGH AVSGTTNSKV VPMSASMSAS  300
VITSGGASNC LAIAQHQFKN LQSGVANPSA NTLVNRIQDT RGLSLMSFAS NLKSNNSTFT  360
ITKQGVPIAE SSQSDFGHVA SDSFVNPSHR GSYMNSKEYG LFLDFTDQET QDQNPLHQFI  420
DDWPKDQSSR SVITWPEEIK SDWTQLSMSI PMASSEFSSS SSSPAQDKRV LSPLRLSREF  480
DPIQMGLAMN SEISDQNKNQ AHWIPISWGS SMGGPLGEVL TYTTSNVGSW KNPSALSLLS  540
EGWDGSQHME SSPTGVLQKA PWASLSNSSS GSGPIAENKK PHDGASLCNN VLSSTLVSSA  600
LIPSVIRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-115	GRF family protein