PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022751814.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 296aa MW: 32452.5 Da PI: 8.675 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00024 | 118 | 140 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_022751814.1 118 FSCNYCQRKFYSSQALGGHQNAH 140 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MLSTKSFHRL PKKVSVCETR EKSIFLMESL RKETSPSEST SCIVSTPKGA PGSDEALKDR 60 EQEAKPSLQL ELKLTTSDCD DLGFKQELNL IDSLNSAGSS DCTAPETPQP TDGEQRVFSC 120 NYCQRKFYSS QALGGHQNAH KRERTLAKRG QRMGAHIAAS ATAFGHPYFH HNHYSSLASL 180 PIHGAYNRSL GIQVHSMIHK PSLISSSTGF GNVYGHHSWS RPPIDQQPAI GKLSMENSHA 240 IATGPTSRAS IGRFNMTRTM MGSPADEVIG NCWWSDGGGL KTKQEDIHKV DLSLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10970.1 | 1e-57 | C2H2 family protein |