PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751781.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 543aa MW: 58635.4 Da PI: 8.8575

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.5e-05	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022751781.1 79 FMCEVCNKGFQRDQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	11.7	0.0008	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + XP_022751781.1 155 WKCEKCSKCYAVQSDWKAHSKIC 177 58*****************9876 PP
3	zf-C2H2	11.5	0.00094	185	203	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + XP_022751781.1 185 DCGTVFSRRDSFITHRAFC 203 9**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MMKGLAVDES ISNLTSASGE VSASSGTRID TGTLYPQQSF SSTNQAPSPK KKSSVPGNPD 60 PDAEVIALSP KTLLATNRFM CEVCNKGFQR DQNLQLHRRG HNLPWKLKQR TNKEVRKKVY 120 VCPETTCVHH DPSRALGDLT GIKKHFCRKH GEKKWKCEKC SKCYAVQSDW KAHSKICGTR 180 EYRCDCGTVF SRRDSFITHR AFCNALAEES ARAITAPNPV LLSSHQPCSS FSHMTDLQTQ 240 LHSHALSVKR EQDHLFDARV PADSIPPWLA CPPGGVGAGP GSSSALLLDQ PLAQNENPSQ 300 NPSSNTLPPF QAPSASPHMS ATALLQKAAQ TGVTISKPLQ SPVAMQRHHH QQAHMSGTTG 360 FTSLAPSAAD SGLGLSAREE RGSGFPHALA SFGNKADVTS GFTEQAIAAT NSTAGAGGGA 420 APKYSLLHDM MTSLSSISGF DGSSSFEQSF NGIWDTKGNR VYFQETIDLS KTTESELSRS 480 DREGRGSSST SSNIGGNDIL TRDFLGLKAF PHRDFPNLAR LDRINSSSAY GQQNKQHQTP 540 WQG

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MMKGLAVDES ISNLTSASGE VSASSGTRID TGTLYPQQSF SSTNQAPSPK KKSSVPGNPD  60
PDAEVIALSP KTLLATNRFM CEVCNKGFQR DQNLQLHRRG HNLPWKLKQR TNKEVRKKVY  120
VCPETTCVHH DPSRALGDLT GIKKHFCRKH GEKKWKCEKC SKCYAVQSDW KAHSKICGTR  180
EYRCDCGTVF SRRDSFITHR AFCNALAEES ARAITAPNPV LLSSHQPCSS FSHMTDLQTQ  240
LHSHALSVKR EQDHLFDARV PADSIPPWLA CPPGGVGAGP GSSSALLLDQ PLAQNENPSQ  300
NPSSNTLPPF QAPSASPHMS ATALLQKAAQ TGVTISKPLQ SPVAMQRHHH QQAHMSGTTG  360
FTSLAPSAAD SGLGLSAREE RGSGFPHALA SFGNKADVTS GFTEQAIAAT NSTAGAGGGA  420
APKYSLLHDM MTSLSSISGF DGSSSFEQSF NGIWDTKGNR VYFQETIDLS KTTESELSRS  480
DREGRGSSST SSNIGGNDIL TRDFLGLKAF PHRDFPNLAR LDRINSSSAY GQQNKQHQTP  540
WQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	106	118	KLKQRTNKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-105	C2H2 family protein