PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751739.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 523aa MW: 58684.4 Da PI: 8.2907

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.4	9.5e-12	343	387	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f+ Lr+llP+ +K +Ka++L + eY+ sL XP_022751739.1 343 HMMSERKRREKLNESFHALRSLLPSG-----TKKDKASMLISTREYLTSL 387 8899*******************8.....7*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MDAVFHLDEA SRSEFLQLLM QSTGCTYICL WSYQHQANCL VGWDGCYNEV NAPPGALGLF 60 VKYRQLIFTL GNDHGLVPGF AFMNNRPYIE LRELDLQNRA SDWTQRQFFR EAGIKTAVFM 120 GCRSGEIELG SSNVVHLNME MEMRNFFPED FSRQLCPAGD QLPQPTDPNR PSSSSSSLRS 180 LSTGSPDSSL IFTIPTASHP QLPTETTPSS LQPVSSSMND PHEQAMQALS QMRSNIQLPT 240 LESENAAMTR AILAVLTSPS SSSSSTSQHP QQSQNLPYNY QPNPKASAFK RYSSVLGAPT 300 TPVRASLRAR SMLNRAIMFY RKFNLARREQ LLRSRPTSNQ LHHMMSERKR REKLNESFHA 360 LRSLLPSGTK KDKASMLIST REYLTSLKSQ IEELSRRNQL LEAQLLPSRE AAGGEVSGSS 420 NERLNVRITP VSESTSEQRL VDLRVSVRGE RPMVDILIHL LEFLKLDRNV SLMSIEANTQ 480 ITESGSVNHV NLRLRIEGNG WDESTFLEAV RRLVADLAQC SNI

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MDAVFHLDEA SRSEFLQLLM QSTGCTYICL WSYQHQANCL VGWDGCYNEV NAPPGALGLF  60
VKYRQLIFTL GNDHGLVPGF AFMNNRPYIE LRELDLQNRA SDWTQRQFFR EAGIKTAVFM  120
GCRSGEIELG SSNVVHLNME MEMRNFFPED FSRQLCPAGD QLPQPTDPNR PSSSSSSLRS  180
LSTGSPDSSL IFTIPTASHP QLPTETTPSS LQPVSSSMND PHEQAMQALS QMRSNIQLPT  240
LESENAAMTR AILAVLTSPS SSSSSTSQHP QQSQNLPYNY QPNPKASAFK RYSSVLGAPT  300
TPVRASLRAR SMLNRAIMFY RKFNLARREQ LLRSRPTSNQ LHHMMSERKR REKLNESFHA  360
LRSLLPSGTK KDKASMLIST REYLTSLKSQ IEELSRRNQL LEAQLLPSRE AAGGEVSGSS  420
NERLNVRITP VSESTSEQRL VDLRVSVRGE RPMVDILIHL LEFLKLDRNV SLMSIEANTQ  480
ITESGSVNHV NLRLRIEGNG WDESTFLEAV RRLVADLAQC SNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	347	352	ERKRRE
2	348	353	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	3e-78	bHLH family protein