PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751373.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 529aa MW: 54910.6 Da PI: 8.391

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022751373.1 61 FICEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	11.1	0.0012	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022751373.1 137 WKCDKCSKKYAVQSDWKAHSKIC 159 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MPADLDNSSA ASGEASVSST GNENPPPKST VKKKRNLPGM PDPDAEVIAL SPKTLLATNR 60 FICEICNKGF QRDQNLQLHR RGHNLPWKLR QRTSKEVKKR VYVCPESTCV HHDPSRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFIN 180 HRAFCDALAE ESARAQTQPQ PQNQNQAVAN ANSDSDLKVQ AVDSSPPPLT ASAPSPPPVQ 240 APAPAPTPTP AAPALPQSTS VVSSSVLPIQ SSELPENPTP IVEEAPAPAP VGVNGNCSSS 300 TSSVSNGNSS SSVFASLFAS STASASLQPP QSPAFTDLIR AMGGPDCSAG LAPSTSTEPI 360 SLCLSTSHGS SIFGTAGQER RQYAPPPQPT MSATALLQKA AQMGAAATNA SLLRGLGLVS 420 SSSSSAQQHN LQWGQRQVEP DNASVAVGLG LGLPCDGSSG LKELMMGTPV FGPKQATLDF 480 LGLGVAAGGS PNGGLSALMT SIGGGLDFAA AATSFGGGDF TSKDIGRSS

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MPADLDNSSA ASGEASVSST GNENPPPKST VKKKRNLPGM PDPDAEVIAL SPKTLLATNR  60
FICEICNKGF QRDQNLQLHR RGHNLPWKLR QRTSKEVKKR VYVCPESTCV HHDPSRALGD  120
LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFIN  180
HRAFCDALAE ESARAQTQPQ PQNQNQAVAN ANSDSDLKVQ AVDSSPPPLT ASAPSPPPVQ  240
APAPAPTPTP AAPALPQSTS VVSSSVLPIQ SSELPENPTP IVEEAPAPAP VGVNGNCSSS  300
TSSVSNGNSS SSVFASLFAS STASASLQPP QSPAFTDLIR AMGGPDCSAG LAPSTSTEPI  360
SLCLSTSHGS SIFGTAGQER RQYAPPPQPT MSATALLQKA AQMGAAATNA SLLRGLGLVS  420
SSSSSAQQHN LQWGQRQVEP DNASVAVGLG LGLPCDGSSG LKELMMGTPV FGPKQATLDF  480
LGLGVAAGGS PNGGLSALMT SIGGGLDFAA AATSFGGGDF TSKDIGRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-113	C2H2 family protein