PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022751304.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | Dof | ||||||||
Protein Properties | Length: 328aa MW: 34983.7 Da PI: 8.6322 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.5 | 7e-39 | 60 | 119 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++s XP_022751304.1 60 NQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKSCRRYWTKGGALRNVPIGGGCRKNKNTS 119 57899****************************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MIQELLGGAA GLSFGEERKV SISGSILEGT LTSSPSPSPS SSSSTTSSTT TTTNSATSGN 60 QNLRCPRCDS SNTKFCYYNN YNLTQPRHFC KSCRRYWTKG GALRNVPIGG GCRKNKNTSV 120 STSLGKSSAA KMKTVVSEIG RSGLGNGFDH ELQSSPILWA SPQSSHLLAL LRTTQNHNPN 180 TLCNPVSIKE EVSLLGSHVM NEQEVAAGAL NTRTLGLDPL SQVPSLGLCN PFWKNNQHQA 240 QQQQQNNNGF LVREVQNTGI QELYQRLKSS SSYCSDSSAV VLSNVASSSS SSSSILESAP 300 VAAGELGYWN PVFSSSWSDL PTTNGAYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 1e-33 | Dof family protein |