PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751256.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 504aa MW: 56553.2 Da PI: 6.9997

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.4e-17	158	207	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022751256.1 158 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 207 78*****************......55**********************997 PP
2	AP2	40.6	6.5e-13	250	297	1	52
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k XP_022751256.1 250 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDSEIEAARAYDRAAIK 297 89******.7**5553..2.26******99*******987 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MEKMWDLNDS PDQPRDDESE GCSSQKTSND GDEDKGKRVG SVSNSSSSAV VIEDGSEEED 60 GERVQAALKK RRSKIFGFSV PYEEESMGSD PDPVTRQFFP LDQDPEMGAT SGGSGSGFPR 120 AHWVGVKFCQ SESLVPETTV EASQPMKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG 180 KQVYLGGFDT AHAAARAYDR AAIKFRGVEA DINFSIEDYE EDLKQMSNLT KEEFVHVLRR 240 QSTGFPRGSS KYRGVTLHKC GRWEARMGQF LGKKYVYLGL FDSEIEAARA YDRAAIKSNG 300 KDAVTNFDPS IYDNEFNSGG NAGGHNLDLS LGNSTSKQSN PEFGADRQNA VGDQHSLPPE 360 ADWRYRGFRP KLMNMQQKPC RSDDPHRRSD RYSEAETMQL LSQTHIQSPA SVKSNEMQRY 420 GQLRRPEENH MSGILPQHVN PSTYQIHFPS NSNGIRIGSD LSLSTSDRQW QPGPHQLFAN 480 TAASSGFPSQ IRPSQTWLQK NGFY

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MEKMWDLNDS PDQPRDDESE GCSSQKTSND GDEDKGKRVG SVSNSSSSAV VIEDGSEEED  60
GERVQAALKK RRSKIFGFSV PYEEESMGSD PDPVTRQFFP LDQDPEMGAT SGGSGSGFPR  120
AHWVGVKFCQ SESLVPETTV EASQPMKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG  180
KQVYLGGFDT AHAAARAYDR AAIKFRGVEA DINFSIEDYE EDLKQMSNLT KEEFVHVLRR  240
QSTGFPRGSS KYRGVTLHKC GRWEARMGQF LGKKYVYLGL FDSEIEAARA YDRAAIKSNG  300
KDAVTNFDPS IYDNEFNSGG NAGGHNLDLS LGNSTSKQSN PEFGADRQNA VGDQHSLPPE  360
ADWRYRGFRP KLMNMQQKPC RSDDPHRRSD RYSEAETMQL LSQTHIQSPA SVKSNEMQRY  420
GQLRRPEENH MSGILPQHVN PSTYQIHFPS NSNGIRIGSD LSLSTSDRQW QPGPHQLFAN  480
TAASSGFPSQ IRPSQTWLQK NGFY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	74	KKRRSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-127	AP2 family protein