PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022751255.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 507aa    MW: 56870.4 Da    PI: 6.8465
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022751255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.5e-17158207155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022751255.1 158 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 207
                     78*******************......55************************997 PP
2AP240.56.6e-13250297152
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                     s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k
  XP_022751255.1 250 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDSEIEAARAYDRAAIK 297
                     89********.7******5553..2.26**********99*********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    
MEKMWDLNDS PDQPRDDESE GCSSQKTSND GDEDKGKRVG SVSNSSSSAV VIEDGSEEED  60
GERVQAALKK RRSKIFGFSV PYEEESMGSD PDPVTRQFFP LDQDPEMGAT SGGSGSGFPR  120
AHWVGVKFCQ SESLVPETTV EASQPMKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG  180
KQVYLGGFDT AHAAARAYDR AAIKFRGVEA DINFSIEDYE EDLKQMSNLT KEEFVHVLRR  240
QSTGFPRGSS KYRGVTLHKC GRWEARMGQF LGKKYVYLGL FDSEIEAARA YDRAAIKSNG  300
KDAVTNFDPS IYDNEFNSGE TSGNAGGHNL DLSLGNSTSK QSNPEFGADR QNAVGDQHSL  360
PPEADWRYRG FRPKLMNMQQ KPCRSDDPHR RSDRYSEAET MQLLSQTHIQ SPASVKSNEM  420
QRYGQLRRPE ENHMSGILPQ HVNPSTYQIH FPSNSNGIRI GSDLSLSTSD RQWQPGPHQL  480
FANTAASSGF PSQIRPSQTW LQKNGFY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16974KKRRSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-128AP2 family protein