PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751177.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 679aa MW: 75349.3 Da PI: 6.6793

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	328	387	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022751177.1 328 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 387 78*****************988886678446***********************98 PP
2	AP2	45.6	1.7e-14	432	481	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022751177.1 432 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 481 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MKSMSNDDNN NSNNTTNWLG FSLSPLMKME VSNQDPHHQT QSASDAVAAG GGSGVTTAVP 60 SSFFQSPSHL NYGLYYGVEG QNGGLYSHFP VMPLKSDGSL CLMEALGRSQ PPAMVPTSTP 120 KLEDFFGGAA MGTHHYESSD REAMSLSLDS MYYHQNPDQE HNNQNCLDHL QHSSRQQHQQ 180 QLPVQQYQYY SGYSNHEMLL GEEAKETHVT DCNLQLPPMA DDRAPGVKHW VSRNYSTEHA 240 MNQKMIGCMG DNGAESGSIG AMAYGDLQSL SLSMSPGSQS SCVTGSQQIS PSATDYAAME 300 TKKRGPEKVD QKQIVHRKSI DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CKKEGQSRKG 360 RQVYLGGYDM EEKAARAYDL AALKYWGPST HINFPLEDYQ KELEEMKNMT RQEYVAHLRR 420 KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR 480 GVNAVTNFDI TRYDVERIMA SNTLLAGELA RRNKDIGTGN DEAINHNLLT DNSNGESNIS 540 SKNNEGQPDW KMVLYQSSEQ QLEQKEPNIT ENYKTQTFSL APQNVAGIDT ISSGQREADD 600 SSKMGTYLSN ASSSVTRLSS SREVIPDRSS LPMSFAMPPP ATKLFTSSAN AVNSWIPSAQ 660 LRPALSMPHM SVFAAWTDA

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MKSMSNDDNN NSNNTTNWLG FSLSPLMKME VSNQDPHHQT QSASDAVAAG GGSGVTTAVP  60
SSFFQSPSHL NYGLYYGVEG QNGGLYSHFP VMPLKSDGSL CLMEALGRSQ PPAMVPTSTP  120
KLEDFFGGAA MGTHHYESSD REAMSLSLDS MYYHQNPDQE HNNQNCLDHL QHSSRQQHQQ  180
QLPVQQYQYY SGYSNHEMLL GEEAKETHVT DCNLQLPPMA DDRAPGVKHW VSRNYSTEHA  240
MNQKMIGCMG DNGAESGSIG AMAYGDLQSL SLSMSPGSQS SCVTGSQQIS PSATDYAAME  300
TKKRGPEKVD QKQIVHRKSI DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CKKEGQSRKG  360
RQVYLGGYDM EEKAARAYDL AALKYWGPST HINFPLEDYQ KELEEMKNMT RQEYVAHLRR  420
KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR  480
GVNAVTNFDI TRYDVERIMA SNTLLAGELA RRNKDIGTGN DEAINHNLLT DNSNGESNIS  540
SKNNEGQPDW KMVLYQSSEQ QLEQKEPNIT ENYKTQTFSL APQNVAGIDT ISSGQREADD  600
SSKMGTYLSN ASSSVTRLSS SREVIPDRSS LPMSFAMPPP ATKLFTSSAN AVNSWIPSAQ  660
LRPALSMPHM SVFAAWTDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-133	AP2 family protein