PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022751136.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 503aa MW: 55368.1 Da PI: 5.8662

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022751136.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.6	4.3e-15	219	278	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022751136.1 219 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 278 57*****************666664478446***********************98 PP
2	AP2	49.8	8.3e-16	321	372	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022751136.1 321 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 372 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MAPASNWLSF SLSPMEMLRS SSEPQFMAHE GSSAAASSHY LIDNFYANEG EDNQSKEARS 60 PAMDDEHPIL TSFHQQAPKL EDFLGDSSSI VRYSDSQAET QDSSLTQIYD HSGSAYFNEH 120 QDLKAITGFP AFSTNSGSEV DDSASMGRTR LTAVEFPGQS IESSGTELGF SDCPTAGNLS 180 LGVNQSCEDN NNSTNNKAIV SVDTNCSKKN DETLGQRTSI YRGVTRHRWT GRYEAHLWDN 240 SCRREGQARK GRQVYLGGYD KEEKAARAYD LAALKYWGPT ATTNFSISNY SKELEEMKHV 300 TKQEFLASLR RKSSGFSRGA SIYRGVTRHH QQGRWQARIG RVAGNKDLYL GTFATEEEAA 360 EAYDIAAIKF RGVNAVTNFE MNRYDVATIA KSSLPIGGAA KRLKLSLESE LKPIVNHEQQ 420 SLCSSNSNSI SFAPLEPISA IPCGIPFDTA AAAAFYQQDL YHHLQTANIG ISDLPGSSST 480 MATPMMVMPQ PAAEFFLWPH QSY

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MAPASNWLSF SLSPMEMLRS SSEPQFMAHE GSSAAASSHY LIDNFYANEG EDNQSKEARS  60
PAMDDEHPIL TSFHQQAPKL EDFLGDSSSI VRYSDSQAET QDSSLTQIYD HSGSAYFNEH  120
QDLKAITGFP AFSTNSGSEV DDSASMGRTR LTAVEFPGQS IESSGTELGF SDCPTAGNLS  180
LGVNQSCEDN NNSTNNKAIV SVDTNCSKKN DETLGQRTSI YRGVTRHRWT GRYEAHLWDN  240
SCRREGQARK GRQVYLGGYD KEEKAARAYD LAALKYWGPT ATTNFSISNY SKELEEMKHV  300
TKQEFLASLR RKSSGFSRGA SIYRGVTRHH QQGRWQARIG RVAGNKDLYL GTFATEEEAA  360
EAYDIAAIKF RGVNAVTNFE MNRYDVATIA KSSLPIGGAA KRLKLSLESE LKPIVNHEQQ  420
SLCSSNSNSI SFAPLEPISA IPCGIPFDTA AAAAFYQQDL YHHLQTANIG ISDLPGSSST  480
MATPMMVMPQ PAAEFFLWPH QSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-179	AP2 family protein