PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022751135.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 515aa    MW: 56799.8 Da    PI: 6.0897
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022751135.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.4e-15231290155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  XP_022751135.1 231 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 290
                     57*******************666664478446*************************98 PP
2AP249.88.6e-16333384155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  XP_022751135.1 333 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 384
                     57****************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    
MAPASNWLSF SLSPMEMLRS SSEPQFMAHE GSSAAASSHY LIDNFYANGW TNSKHQMFLT  60
EGEDNQSKEA RSPAMDDEHP ILTSFHQQAP KLEDFLGDSS SIVRYSDSQA ETQDSSLTQI  120
YDHSGSAYFN EHQDLKAITG FPAFSTNSGS EVDDSASMGR TRLTAVEFPG QSIESSGTEL  180
GFSDCPTAGN LSLGVNQSCE DNNNSTNNKA IVSVDTNCSK KNDETLGQRT SIYRGVTRHR  240
WTGRYEAHLW DNSCRREGQA RKGRQVYLGG YDKEEKAARA YDLAALKYWG PTATTNFSIS  300
NYSKELEEMK HVTKQEFLAS LRRKSSGFSR GASIYRGVTR HHQQGRWQAR IGRVAGNKDL  360
YLGTFATEEE AAEAYDIAAI KFRGVNAVTN FEMNRYDVAT IAKSSLPIGG AAKRLKLSLE  420
SELKPIVNHE QQSLCSSNSN SISFAPLEPI SAIPCGIPFD TAAAAAFYQQ DLYHHLQTAN  480
IGISDLPGSS STMATPMMVM PQPAAEFFLW PHQSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.20.0AP2 family protein