PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022751088.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 365aa MW: 41211.7 Da PI: 6.6044 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 22.8 | 2.3e-07 | 145 | 166 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_022751088.1 145 FCEICGKGFKRDANLRMHMRAH 166 6*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence |
MSNPGEPFRV SPEYPNSGGA SLWRQDPIAY ADPLVPLLNL STVKTRMDSL QLFLSHSVNT 60 NTLISKDQMD LVSSEIASAV QQIIVNGAAL LSCAQIGHYP NPIPNSTSIP NPTTEPKPEF 120 DDYDEGESEI IELDAVELLS EHLHFCEICG KGFKRDANLR MHMRAHGNQY KTPEALAKKP 180 ENKWEVKNSG RKTRFSCPYD GCNRNKKHEK FRPLKSVICV RNHFRRSHCP KMYGCNRCHK 240 KSFSVLADLK SHLKHCGGGE EGKKWKCSCG NTFSRKDKLF RHVSLFEGHM PAVVEEEEED 300 RKLKGVVAME EDEEKQEELM EKEGCLEDGF FDGLLDGFGS FENYCLQDVL GPSHGGLYHF 360 EKGMI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 178 | 192 | KKPENKWEVKNSGRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.3 | 5e-62 | C2H2 family protein |