PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022750922.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NF-YB | ||||||||
Protein Properties | Length: 198aa MW: 22490 Da PI: 6.3571 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 178.7 | 5.5e-56 | 25 | 120 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd++wa++tlGfe+yv plk+yl+kyre+ege XP_022750922.1 25 KEQDRFLPIANVGRIMKKVIPSNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEEYVGPLKLYLTKYREIEGE 119 89*******************************************************************************************99 PP NF-YB 97 k 97 k XP_022750922.1 120 K 120 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MEDEISHGGS PESPCVKSNG SNNNKEQDRF LPIANVGRIM KKVIPSNGKI SKDAKETVQE 60 CVSEFISFVT GEASDKCQRE KRKTINGDDI IWAITTLGFE EYVGPLKLYL TKYREIEGEK 120 LNVPKQQRSE QKQQQQQQQS QHEQNIPYNT NIVYSSANLL SHHPSFVPSD QPFSLPFSPN 180 SIQKQLQQQD QIDSVGHW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G13570.1 | 2e-65 | NF-YB family protein |