PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022750496.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 454aa MW: 53144.6 Da PI: 9.5743

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022750496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.7	5.1e-15	12	74	29	90
FAR1 29 tkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++fvCskeg+r+++ k + + + ++ etr+gCka++ v+k++++kw ++ l ++H+H+++ XP_022750496.1 12 ELEKFVCSKEGFRNKKYLKrEYRIQAPSDETRVGCKAMIYVSKKDNDKWLISILIKNHTHKFV 74 5679********998773456677999*****************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MSLDHDIYNG VELEKFVCSK EGFRNKKYLK REYRIQAPSD ETRVGCKAMI YVSKKDNDKW 60 LISILIKNHT HKFVILKSAQ FLRVHKKKTR VQRNLIDVLD DLGIRSSKIM LVLATELGGM 120 DTSKNPGFFY AIQMDAEGQL ANCFWADFRS RMTYKYFGDV VAFDPTYLIN KYKMPFVPFT 180 GVNHHYQSIL FGCVLLWDET KETFVWLLNT WLEAMFGYHP KTIITDQDAA ITNVVAKRSE 240 SMNKYFKDYV NSSTLMSKFV IQYKKALDAR YNKNREKIFK SINSKSILKT FYPMKKEALE 300 YVTKKITVNE QVFRYRVHEF DKEKPEYIVT FVSLSATTTC SCHMFEFVGI LCRHQLTILI 360 KKMHSLPDQY VLKWWTRDAK KGEVESILDE QHDSAPKSSM ILFNNVIIHS MELSKKASRF 420 QKHYDMAIEG LQRLFEELDA FKISEEEKSS SAGV

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MSLDHDIYNG VELEKFVCSK EGFRNKKYLK REYRIQAPSD ETRVGCKAMI YVSKKDNDKW  60
LISILIKNHT HKFVILKSAQ FLRVHKKKTR VQRNLIDVLD DLGIRSSKIM LVLATELGGM  120
DTSKNPGFFY AIQMDAEGQL ANCFWADFRS RMTYKYFGDV VAFDPTYLIN KYKMPFVPFT  180
GVNHHYQSIL FGCVLLWDET KETFVWLLNT WLEAMFGYHP KTIITDQDAA ITNVVAKRSE  240
SMNKYFKDYV NSSTLMSKFV IQYKKALDAR YNKNREKIFK SINSKSILKT FYPMKKEALE  300
YVTKKITVNE QVFRYRVHEF DKEKPEYIVT FVSLSATTTC SCHMFEFVGI LCRHQLTILI  360
KKMHSLPDQY VLKWWTRDAK KGEVESILDE QHDSAPKSSM ILFNNVIIHS MELSKKASRF  420
QKHYDMAIEG LQRLFEELDA FKISEEEKSS SAGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-58	FAR1 family protein