PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022750458.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 311aa MW: 33273.1 Da PI: 9.4771 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 123.7 | 2e-38 | 69 | 154 | 2 | 87 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsss 87 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i ++tg+++++as a+ s+s+++ s XP_022750458.1 69 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIMAATGSGTIPASVLaAAGGSVSQQG-ASL 154 789******************************************************************88853344444433.222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MDPKGSKPPP QEVPNFLSLP QQPQQHQQHP QPQQQQQQPQ NMGENKPAEI KDFQIVIADK 60 EEGKKQQLAP KRSSNKDRHT KVEGRGRRIR MPALCAARIF QLTRELGHKS DGETIQWLLQ 120 QAEPSIMAAT GSGTIPASVL AAAGGSVSQQ GASLSAGLHQ KMEELGGSSV GSGSSRTSWA 180 MVGGNLGRPH HVATGLWPPV SGYGFQSSSG PSTTNLGSES SNYLQKIGFP GFDLPATNMG 240 PMSFTSILGA ANQQLPGLEL GLSQDGPIGV LNPQALSQIY QQMGQARLHQ QQQHQHQQQP 300 PAKDDSQGSG Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 2e-78 | TCP family protein |