PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022750306.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 636aa MW: 69868.9 Da PI: 6.352 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.4 | 6.4e-28 | 203 | 255 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl XP_022750306.1 203 PRVVWSVELHHKFVTAVKQL-GIDKAVPKKILELMNVEKLTRENVASHLQKYRL 255 9*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 39.7 | 1.1e-12 | 204 | 254 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v avkqlG + +k+I + m+ +++t++++ s++qky+ XP_022750306.1 204 RVVWSVELHHKFVTAVKQLGIDkaVPKKILELMNvEKLTRENVASHLQKYR 254 678********************************99*************7 PP | |||||||
3 | Response_reg | 75.5 | 2e-25 | 20 | 128 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ + ll+++l++ +y +v+ ++++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+ +++ + + G XP_022750306.1 20 VLAVDDDPTCLLLLETLLRRCQY-NVTITSQAVTALKLLRENKnnFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGITHG 112 799********************.***************888888*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 + d+l Kp+ +eel + XP_022750306.1 113 GCDYLLKPVRIEELQN 128 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 636 aa Download sequence |
MTVERVISEK KDQFPIGMRV LAVDDDPTCL LLLETLLRRC QYNVTITSQA VTALKLLREN 60 KNNFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGGCDYLLKP 120 VRIEELQNIW QHVVRRKKFD RKDRYNSGSQ DKAYTDSGEA ARMGNVDQNG KLNKKRKDQN 180 EEEDEERDEN GHDSEDPSTQ KEPRVVWSVE LHHKFVTAVK QLGIDKAVPK KILELMNVEK 240 LTRENVASHL QKYRLYLKRI TCLANQQANM AAAVGSADST YLRMGSLNGL GNFHTLAGSD 300 QLRNAAFRSF PPGGVLGRLN TPAGLGMHGL PSPGMIQLNH VQNLGNTNND QSKLQSFVIP 360 GNHNANILQG MPMSLELDQL QNNKGVNHIG ELSTADNSTV FPVSGSLINA RTTGCSDNPL 420 PGVTSNSLML EGSSQQATLH ASNLRDSVSA MGFKSGNPLS HFTSMAPASD QLQDSKADLQ 480 SQASPISCNA GQIIRNAPQE WNAARKDATY QSNVMCCSIN SSISVNGAMD HLGPCLDQNN 540 PIFQRNIDLD SIGPSNFVDP LSIKRCEGEN LAMEPSVTQK EGYFVVQPRL QGSYIPDNIG 600 SLEDLASAMM KREQDKGEAA DGNFGCNAYS RRTNCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-138 | ARR-B family protein |