PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022749891.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 512aa MW: 57717.2 Da PI: 9.1595

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022749891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.3	3.6e-12	22	70	37	87
trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 k++e g++r +k+Ckek+en+ k++k++k+g+ ++ +t+++fdqlea XP_022749891.1 22 KLAELGYHRRAKKCKEKFENVYKYHKRTKDGRTAKSY--GKTYRFFDQLEA 70 6799***************************9754..456*****85 PP
2	trihelix	105.1	4.9e-33	339	424	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k e+ aLi++r+++++++++g k+plWee+s++m++ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a XP_022749891.1 339 RWPKVETEALIKLRTSLDSKYQDGGPKGPLWEEISSAMKKLGYNRNAKKCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 424 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MGRGFQDKNR NGVVFSTVDI RKLAELGYHR RAKKCKEKFE NVYKYHKRTK DGRTAKSYGK 60 TYRFFDQLEA LENNPYIRSP VAAPLPPTQL KPQGQPAANP PSLTHVTVPS TTLSNLPQNV 120 VPPNINHTAP SCPSTNPTIQ PPPPTTNPTI PSFPTISADQ MSNSTSSSTS SDLELEGRRK 180 RKRKWKNFFE RLMKEVIRKQ KGMQKKFLEA IEKCEHERMV REEAWRMQEM ARINKEREIL 240 AQERSMATAK DDAVMAFLQK LSEQQNPGHA QTNAIPSQQP QPPAPQPVLA VAPAVAPVAQ 300 PVAAAVSAPA PPLVPLPVVN LDVSKTDNGD QSHTPSSSRW PKVETEALIK LRTSLDSKYQ 360 DGGPKGPLWE EISSAMKKLG YNRNAKKCKE KWENINKYFK KVKESNKKRP EDSKTCPYFH 420 QLDALYREKN KHDCSSNQLK PENSVPLMVR PEQQWPPPPP EPNHHEQDHV MEDMESDQNQ 480 DEDDKEGDVE EEDEGDGYEI IVSKPVSMGT GG

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MGRGFQDKNR NGVVFSTVDI RKLAELGYHR RAKKCKEKFE NVYKYHKRTK DGRTAKSYGK  60
TYRFFDQLEA LENNPYIRSP VAAPLPPTQL KPQGQPAANP PSLTHVTVPS TTLSNLPQNV  120
VPPNINHTAP SCPSTNPTIQ PPPPTTNPTI PSFPTISADQ MSNSTSSSTS SDLELEGRRK  180
RKRKWKNFFE RLMKEVIRKQ KGMQKKFLEA IEKCEHERMV REEAWRMQEM ARINKEREIL  240
AQERSMATAK DDAVMAFLQK LSEQQNPGHA QTNAIPSQQP QPPAPQPVLA VAPAVAPVAQ  300
PVAAAVSAPA PPLVPLPVVN LDVSKTDNGD QSHTPSSSRW PKVETEALIK LRTSLDSKYQ  360
DGGPKGPLWE EISSAMKKLG YNRNAKKCKE KWENINKYFK KVKESNKKRP EDSKTCPYFH  420
QLDALYREKN KHDCSSNQLK PENSVPLMVR PEQQWPPPPP EPNHHEQDHV MEDMESDQNQ  480
DEDDKEGDVE EEDEGDGYEI IVSKPVSMGT GG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	178	183	RRKRKR
2	178	184	RRKRKRK
3	178	201	RRKRKRKWKNFFERLMKEVIRKQK
4	179	184	RKRKRK
5	179	202	RRKRKRKWKNFFERLMKEVIRKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-121	Trihelix family protein