PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022749179.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 345aa MW: 39934.6 Da PI: 9.0081

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022749179.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.3	8.8e-16	5	95	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ff +l+ s++l + l++p +f++++ + s+ l+ ++g +W+v + +k ++++++++GW+eFv+ +++ f+vF+++g+s f v++f XP_022749179.1 5 FFHKLILSSTLLDKKLRIPDNFVQKFRDE--LSIAAALTVPDGHVWRVGI--KKADNKVWFQEGWQEFVERYYIRVCYFLVFRYEGNSAF--SVSIF 95 778888889999999******999755..999************..********************************9999..88887 PP
2	B3	66.3	4.4e-21	242	332	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 vl ps+ + ++++lp fae+h +g++ + ++l+ ++g++W v++ yr+++ +++GW eF +n+L egD++vF+l +++ef l+v+vf XP_022749179.1 242 VLRPSYLYRGCIMYLPSCFAEKHlSGVS-G--SIKLQLPDGKQWPVRCLYRRGR--AKFSQGWYEFTLENNLGEGDVCVFELLRSREFVLKVTVF 331 78899****************86663.3..59999*******666666..5599******************999*******9 PP - CS B3 98 r 98 r XP_022749179.1 332 R 332 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MPRPFFHKLI LSSTLLDKKL RIPDNFVQKF RDELSIAAAL TVPDGHVWRV GIKKADNKVW 60 FQEGWQEFVE RYYIRVCYFL VFRYEGNSAF SVSIFNLYNS EINYHSNAFG GTQYNHGKQY 120 PFEELEDDEC ISPALQNLFG GSKVKNCINW NREVNLHTAK VVNNQPIRGA EMPKPKKPGG 180 KKRKCNPNEQ DSSVGHEDDV EMHFSFYESA SARKRTVTTE ERERAINAAK AFEPTNPFCR 240 VVLRPSYLYR GCIMYLPSCF AEKHLSGVSG SIKLQLPDGK QWPVRCLYRR GRAKFSQGWY 300 EFTLENNLGE GDVCVFELLR SREFVLKVTV FRVMESTGLM RQSID

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MPRPFFHKLI LSSTLLDKKL RIPDNFVQKF RDELSIAAAL TVPDGHVWRV GIKKADNKVW  60
FQEGWQEFVE RYYIRVCYFL VFRYEGNSAF SVSIFNLYNS EINYHSNAFG GTQYNHGKQY  120
PFEELEDDEC ISPALQNLFG GSKVKNCINW NREVNLHTAK VVNNQPIRGA EMPKPKKPGG  180
KKRKCNPNEQ DSSVGHEDDV EMHFSFYESA SARKRTVTTE ERERAINAAK AFEPTNPFCR  240
VVLRPSYLYR GCIMYLPSCF AEKHLSGVSG SIKLQLPDGK QWPVRCLYRR GRAKFSQGWY  300
EFTLENNLGE GDVCVFELLR SREFVLKVTV FRVMESTGLM RQSID

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	184	PKKPGGKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-144	B3 family protein