PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022749051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GATA | ||||||||
Protein Properties | Length: 154aa MW: 16843 Da PI: 10.3851 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.6 | 8.3e-19 | 40 | 74 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++ XP_022749051.1 40 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 74 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MLDPSEKGSD SEDQSKKYPE GISPKETQNQ SISNETKKIC ADCGTSKTPL WRGGPAGPKS 60 LCNACGIRSR KKRRAILGLN KGEDKKSKRG NRNGDNSGSS NTKNLGDNLK QRLLSLGREV 120 LMQRSTVEKQ RRKLGEEEQA AVLLMALSYG SVYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 2e-55 | GATA family protein |