PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022748928.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 370aa    MW: 41803.8 Da    PI: 7.4437
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022748928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.89.1e-09123145426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                       C++f+r+G C +Gd C FaHg
  XP_022748928.1 123 TVCSDFRRGGGCLRGDDCDFAHG 145
                     68********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MSTACTEQHN FQPSHQLSKK VPFKDIEIPP RKLLLSHNHI QGNNTMQLPY ETSLHKYLPS  60
NRNNHEDEDN DADPYATDHF RMYEFKVKSC SWSRSHDWTD CPFAHPGEKA RRRDPRRYRY  120
SSTVCSDFRR GGGCLRGDDC DFAHGVFECW LHPTRYRTEA CKDGKNCKRK VCFFAHSSRE  180
LRLLPEASPE YKNSGSCRSS PMNKNNHCCL FCHSVTSSPT STLLGLSHLS RSPSLSPPLS  240
PMKQRRSLGG FSPISRCSDR LSKFGMEMMS YKNVLNDLMC SLDNMNFCEV PSPMAGGNNF  300
SAANIPWLDV SLNGEDQQQF VLSPSRPSPS GSGEYFGATS TGFGVDEKIN ENGVACDPDP  360
DLEWVNELLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.12e-54C3H family protein