PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022748919.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28604.4 Da PI: 9.8178 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109.4 | 4.2e-34 | 59 | 199 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....tk..sg 81 lp+G++F+Ptd+el+ e+L+ v+++ ++++ +i++ +i++++P++Lp ++++ yfF++ +k+y+tg+rk+r+ t+ + XP_022748919.1 59 LPAGVKFDPTDQELL-EHLEGMVRSDArklhpcMDEFIpTIEREnGICYTHPEKLPG-ASKDGLVRYFFHRPSKAYTTGTRKRRKvhtdTEsgET 151 799************.99****999986675443332333665557**********4.34455678******************75666443356 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+++v+ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y++ XP_022748919.1 152 RWHKTGKTRPVFI-SGKVKGYKKILVLYtnYGKQRKPEKTNWVMHQYHF 199 7************.999***********6657999999*********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MTWCNDSSDV QTIERSSSSS SQKTVTHQRH KDYLVATCPS CGHQIKGRDQ AGIHDLPGLP 60 AGVKFDPTDQ ELLEHLEGMV RSDARKLHPC MDEFIPTIER ENGICYTHPE KLPGASKDGL 120 VRYFFHRPSK AYTTGTRKRR KVHTDTESGE TRWHKTGKTR PVFISGKVKG YKKILVLYTN 180 YGKQRKPEKT NWVMHQYHFG NNEEEKDGEL VVSKVFYQTQ PRHCGSVKHS LPSKSKVLQC 240 TQRFSFHFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 1e-125 | NAC family protein |