PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022748905.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 464aa MW: 51101.6 Da PI: 7.6958

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022748905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.6	3.9e-06	13	51	5	37
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C ++e+ + l+C+ ++ lC C ++ H+ H XP_022748905.1 13 PCGFCNEQIAVLYCRADSAKLCLFCDQHVHSAnllsrkH 51 6***************************99545555555 PP
2	zf-B_box	23.8	9.5e-08	54	98	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C++++ ++++ C +++ lC++C H g H+++p XP_022748905.1 54 SQICDNCGTEPVSVRCATDSLVLCQECDWDAHGGcsvsaaHDRTP 98 579*************************99996688999998877 PP
3	CCT	63.7	5.8e-22	416	459	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk+a XP_022748905.1 416 RGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAA 459 7789*************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MVSPKPEGKG TVPCGFCNEQ IAVLYCRADS AKLCLFCDQH VHSANLLSRK HLRSQICDNC 60 GTEPVSVRCA TDSLVLCQEC DWDAHGGCSV SAAHDRTPVE GFSGCPSALE LASAWGYDLE 120 EKKLSDQSWN RDYQDLMMPA VESWAYKTSV QEMMVPYDCF SYGEMLKKQN LGSGKCKQVI 180 YKQLVDLMKR DFMGGVVADG GGGVGENLVS NVESNGSFLA RQDVIQPQLQ QETQTPFTSL 240 LMMQTQESER IVDGVNVLWN GNLNVQTPQI WDFKLGRLRG EEECNKSQSE EVGYGGSDAG 300 FKIKNFSELM KDTSLTNVKL LGDICHINYP PTSQDDMASV NNNNPSNPGA NQGPATSESN 360 NIPIARPSSG AAFGKTKCSS SSNDVHFMQQ PFLVKGAQAR PAAPNKADLE LLAQNRGNAM 420 QRYKEKKKTR RYDKHIRYES RKARADTRKR VKGRFVKAAN ASAG

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MVSPKPEGKG TVPCGFCNEQ IAVLYCRADS AKLCLFCDQH VHSANLLSRK HLRSQICDNC  60
GTEPVSVRCA TDSLVLCQEC DWDAHGGCSV SAAHDRTPVE GFSGCPSALE LASAWGYDLE  120
EKKLSDQSWN RDYQDLMMPA VESWAYKTSV QEMMVPYDCF SYGEMLKKQN LGSGKCKQVI  180
YKQLVDLMKR DFMGGVVADG GGGVGENLVS NVESNGSFLA RQDVIQPQLQ QETQTPFTSL  240
LMMQTQESER IVDGVNVLWN GNLNVQTPQI WDFKLGRLRG EEECNKSQSE EVGYGGSDAG  300
FKIKNFSELM KDTSLTNVKL LGDICHINYP PTSQDDMASV NNNNPSNPGA NQGPATSESN  360
NIPIARPSSG AAFGKTKCSS SSNDVHFMQQ PFLVKGAQAR PAAPNKADLE LLAQNRGNAM  420
QRYKEKKKTR RYDKHIRYES RKARADTRKR VKGRFVKAAN ASAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28050.1	1e-112	CO-like family protein